RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR5D18Q8NGL1 313 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 ABHD14BQ96IU4 210 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 CLEC18AA5D8T8 446 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 LILRA1O75019 489 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 SPINK2P20155 84 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 Q6ZWC4 215 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 PPP1R32Q7Z5V6 425 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 LINC01551Q86U37 167 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 CLEC18CQ8NCF0 446 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 SLC45A2Q9UMX9 530 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 NBASA2RRP1 2371 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 NKX2-6A6NCS4 301 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 LRRC3CA6NJW4 275 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 Q0VFX4 171 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 SPINK14Q6IE38 97 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 RPUSD4Q96CM3 377 aaKnown RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 SLAMF6Q96DU3 332 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 SPACA9Q96E40 222 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 TXN2Q99757 166 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 SEPSECSQ9HD40 501 aaKnown RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 PLEKHJ1Q9NW61 149 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 LAMTOR2Q9Y2Q5 125 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 LOC105371242A0A075B767 164 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 FOXI3A8MTJ6 420 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 NUPR1O60356 82 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 CD33P20138 364 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 FGF8P55075 233 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 RTP5Q14D33 572 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 ABHD12BQ7Z5M8 362 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 EMC6Q9BV81 110 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 MCTS1Q9ULC4 181 aaKnown RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 PPIAL4AQ9Y536 164 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 IGF2RP11717 2491 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 DUXBA0A1W2PPF3 345 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 HLA-DOBP13765 273 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 RAC2P15153 192 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 GCH1P30793 250 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 SCGB1C1Q8TD33 95 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 HSPB9Q9BQS6 159 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 PATZ1Q9HBE1 687 aaKnown RBP10.42□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF581Q9P0T4 197 aa10.42□□□□□ -0.74
C9orf3-203ENST00000375315 A0A0G2JMM0 328 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 A0A1B0GUS0 222 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 A0A1W2PPB8 328 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 A0A1W2PRS3 328 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 KIR3DP1A8MWS1 328 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 HLA-HP01893 362 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 C17orf67Q0P5P2 114 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF154Q13106 437 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 OR5T1Q8NG75 326 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 WDYHV1Q96HA8 205 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 IMMP1LQ96LU5 166 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 HES7Q9BYE0 225 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 MOB1AQ9H8S9 216 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 HSPB7Q9UBY9 170 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 COX11Q9Y6N1 276 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 A0A0U1RQK1 487 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF737O75373 536 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 SSR4P51571 173 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
C9orf3-203ENST00000375315 RAET1LQ5VY80 246 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 C6orf201Q7Z4U5 140 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 OR5AU1Q8NGC0 362 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 WDR54Q9H977 334 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 DOCK7Q96N67 2140 aa10.41□□□□□ -0.74
C9orf3-203ENST00000375315 IGHV3-15A0A0B4J1V0 119 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 TMEM238LA0A1B0GVL6 79 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 IGHMP01871 453 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 IL3RAP26951 378 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 SLC6A8P48029 635 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF133P52736 654 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 RPL15P61313 204 aaKnown RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 MEF2BQ02080 365 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 ACSF3Q4G176 576 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 FBLN7Q53RD9 439 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 CARD17Q5XLA6 110 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 VHLLQ6RSH7 139 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 YRDCQ86U90 279 aaKnown RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 FAM71F1Q96KD3 344 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 LIME1Q9H400 295 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 MED29Q9NX70 200 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 TMEM250H0YL14 139 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 SUMO1P63165 101 aaKnown RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 Q6ZN92 141 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 FAM57BQ71RH2 274 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-203ENST00000375315 TM2D1Q9BX74 207 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF286AQ9HBT8 521 aa10.4□□□□□ -0.74
C9orf3-203ENST00000375315 RYDENQ9NUL5 291 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms