RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 HYPMO75409 117 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 SYNGR4O95473 234 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 SGMS2Q8NHU3 365 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 RAB40CQ96S21 281 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 SAMD10Q9BYL1 202 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 UQCR10Q9UDW1 63 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 COX11Q9Y6N1 276 aa17.57■□□□□ 0.4
TMEFF1-201ENST00000374879 IGKV1-12A0A0C4DH73 117 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 OR6C6A6NF89 314 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 IGKV1D-12P01611 117 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 ESDP10768 282 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 EGR1P18146 543 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 KRTDAPP60985 99 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 LINC01551Q86U37 167 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 LMX1AQ8TE12 382 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 APH1AQ96BI3 265 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 PARD6GQ9BYG4 376 aaPredicted RBP17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 CCL28Q9NRJ3 127 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 ST3GAL6Q9Y274 331 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 SEC16AO15027 2179 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 PAGE4O60829 102 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 IGLV3-19P01714 112 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 S100A7P31151 101 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 HNRNPA3P51991 378 aaKnown RBP17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 SUMO1P63165 101 aaKnown RBP17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 FOXL1Q12952 345 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 DEFB119Q8N690 84 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 BTF3L4Q96K17 158 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 FAM103A1Q9BTL3 118 aaKnown RBP17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 PSENENQ9NZ42 101 aa17.56■□□□□ 0.4
TMEFF1-201ENST00000374879 C1QTNF9P0C862 333 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 CRISP2P16562 243 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 YPEL3P61236 119 aaPredicted RBP17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 RSPO1Q2MKA7 263 aaPredicted RBP17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 Q6ZRM9 215 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 KMT5CQ86Y97 462 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF738Q8NE65 137 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 OR10V1Q8NGI7 309 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF442Q9H7R0 627 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 ALKBH4Q9NXW9 302 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 PCDH15Q96QU1 1955 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 DIRC3C9JPN6 131 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 SH2D1BO14796 132 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 PPBPP02775 128 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 IGLC2P0DOY2 106 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 IGLC3P0DOY3 106 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 TMEM11P17152 192 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 CTSSP25774 331 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 HINT1P49773 126 aaPredicted RBP17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 C1orf174Q8IYL3 243 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 OSR2Q8N2R0 312 aa17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 NEIL1Q96FI4 390 aaPredicted RBP17.55■□□□□ 0.4
TMEFF1-201ENST00000374879 EFNA2O43921 213 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 CBLN1P23435 193 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 ACSM6Q6P461 480 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 C16orf47Q6ZP98 133 aaPredicted RBP17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 OR5D13Q8NGL4 314 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 PSMF1Q92530 271 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 TAF15Q92804 592 aaKnown RBP eCLIP17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 UBE2L5PA0A1B0GUS4 154 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 LILRA5A6NI73 299 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 SLC22A20A6NK97 555 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 EFNA3P52797 238 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 RNPS1Q15287 305 aaKnown RBP17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF468Q5VIY5 522 aaPredicted RBP17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 VHLLQ6RSH7 139 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 BAGE3Q86Y29 109 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 BAGE2Q86Y30 109 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 BATF2Q8N1L9 274 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 OR4C5Q8NGB2 326 aa17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF703Q9H7S9 590 aaPredicted RBP17.54■□□□□ 0.4
TMEFF1-201ENST00000374879 PGPEP1LA6NFU8 196 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 LTBRP36941 435 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 MPLP40238 635 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 MALLQ13021 153 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 SNAI3Q3KNW1 292 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 FBLN7Q53RD9 439 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 TMEM211Q6ICI0 200 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 RNF2Q99496 336 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 RNF24Q9Y225 148 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 PDCD6O75340 191 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 PIAS2O75928 621 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 OR8B8Q15620 311 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 SMIM15Q7Z3B0 74 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 OR2AE1Q8NHA4 323 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 STARD4Q96DR4 205 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 VPS25Q9BRG1 176 aa17.53■□□□□ 0.4
TMEFF1-201ENST00000374879 TRAF3IP2O43734 574 aaPredicted RBP17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 GCNT2Q8N0V5 402 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 NUDT10Q8NFP7 164 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 ST8SIA1Q92185 356 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF501Q96CX3 271 aaPredicted RBP17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 IGHV2-70DA0A0C4DH43 119 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 SYNGR2O43760 224 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 SCTP09683 121 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 HBG1P69891 147 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 HBG2P69892 147 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 ZNF114Q8NC26 417 aa17.52■□□□□ 0.4
TMEFF1-201ENST00000374879 CADM4Q8NFZ8 388 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms