RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 WDR54Q9H977 334 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 NRXN2Q9P2S2 1712 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 ZNF324O75467 553 aaPredicted RBP8.89□□□□□ -0.99
CD28-202ENST00000374481 GPR12P47775 334 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
CD28-202ENST00000374481 RTL8BQ17RB0 113 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 SPINK9Q5DT21 86 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 TTC32Q5I0X7 151 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 UBALD1Q8TB05 177 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 SEPSECSQ9HD40 501 aaKnown RBP8.89□□□□□ -0.99
CD28-202ENST00000374481 HCFC1R1Q9NWW0 138 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 ELOVL5Q9NYP7 299 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 CD207Q9UJ71 328 aa8.89□□□□□ -0.99
CD28-202ENST00000374481 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 SLC17A3O00476 420 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 AMY1AP04745 511 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 HNRNPA1P09651 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
CD28-202ENST00000374481 ERGP11308 486 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 VN1R4Q7Z5H5 301 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 OR1N2Q8NGR9 330 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 SPPL3Q8TCT6 385 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 CHD3Q12873 2000 aaKnown RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 KIAA1217Q5T5P2 1943 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 PLPP3O14495 311 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 NTSR1P30989 418 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 UCP2P55851 309 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 SUPT4H1P63272 117 aaKnown RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 OR4P4Q8NGL7 312 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 M0R296 226 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 ADH4P08319 380 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 LYL1P12980 280 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 GPR183P32249 361 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 FOXK1P85037 733 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 CSRP2Q16527 193 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 TWSG1Q9GZX9 223 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 IGFLR1Q9H665 355 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 TMEM167BQ9NRX6 74 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 PHIPQ8WWQ0 1821 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 TRIP12Q14669 1992 aaPredicted RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 SCN2AQ99250 2005 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 KIR2DL5BA0A0G2JN68 375 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 KIR2DL5BA0A0G2JPC4 375 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 CD55P08174 381 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 BCL3P20749 454 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 PLGLB1Q02325 96 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 PSG5Q15238 335 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 OR1C1Q15619 314 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 WFDC8Q8IUA0 241 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 KIR2DL5AQ8N109 375 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 MAFAQ8NHW3 353 aaPredicted RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 ZNF519Q8TB69 540 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 ZNF48Q96MX3 618 aaPredicted RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 TBC1D29Q9UFV1 150 aa8.88□□□□□ -0.99
CD28-202ENST00000374481 MRPS16Q9Y3D3 137 aaKnown RBP8.88□□□□□ -0.99
CD28-202ENST00000374481 PRR32B1ATL7 298 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 PSG2P11465 335 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 MYBPHQ13203 477 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 FXYD3Q14802 87 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 TMEM136Q6ZRR5 245 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 PRSS41Q7RTY9 318 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 Q8NFD4 153 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 FGF11Q92914 225 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 SCN8AQ9UQD0 1980 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 OR8B8Q15620 311 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 IBA57Q5T440 356 aaKnown RBP8.87□□□□□ -0.99
CD28-202ENST00000374481 STPG1Q5TH74 334 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 TMEM211Q6ICI0 200 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 CPT1CQ8TCG5 803 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 SP7Q8TDD2 431 aaPredicted RBP8.87□□□□□ -0.99
CD28-202ENST00000374481 SSMEM1Q8WWF3 244 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 ST8SIA1Q92185 356 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 GPHA2Q96T91 129 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 RFNGQ9Y644 331 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 MAP1BP46821 2468 aaKnown RBP8.87□□□□□ -0.99
CD28-202ENST00000374481 IGHV2OR16-5A0A0B4J2B6 119 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 HYPMO75409 117 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 HGFACQ04756 655 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 FAM53BQ14153 422 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 ACSF3Q4G176 576 aaPredicted RBP8.87□□□□□ -0.99
CD28-202ENST00000374481 Q6ZNB5 142 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 SELENOHQ8IZQ5 122 aaKnown RBP8.87□□□□□ -0.99
CD28-202ENST00000374481 SH2D2AQ9NP31 389 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 DOCK8Q8NF50 2099 aa8.87□□□□□ -0.99
CD28-202ENST00000374481 ASAH2BP0C7U1 165 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 F2RP25116 425 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 CEBPDP49716 269 aaPredicted RBP8.86□□□□□ -0.99
CD28-202ENST00000374481 FBXW9Q5XUX1 488 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 ZNF841Q6ZN19 808 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 PPP1R35Q8TAP8 253 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 GUCD1Q96NT3 240 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
CD28-202ENST00000374481 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
CD28-202ENST00000374481 A0A1B0GUS0 222 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 A1L4Q6 167 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 C1QTNF9P0C862 333 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
CD28-202ENST00000374481 ZNF788Q6ZQV5 615 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms