RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 J3QT63 122 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 MGAT2Q10469 447 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 GUCA2BQ16661 112 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 TRBV5-7A0A0A0MS05 114 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 FCGR3AP08637 254 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 RBM11P57052 281 aaKnown RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 MPTX1A8MV57 137 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 A8MWL6 223 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 DNASE2O00115 360 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF205O95201 554 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 ISG15P05161 165 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 PUSL1Q8N0Z8 303 aaKnown RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 CLEC1BQ9P126 229 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 TMEM210A6NLX4 147 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 TSPAN2O60636 221 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 NMBP08949 121 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 KCNK7Q9Y2U2 307 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 PSG2P11465 335 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 FOLR2P14207 255 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.36□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 C1orf210Q8IVY1 113 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 P2RX4Q99571 388 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 SOX21Q9Y651 276 aaPredicted RBP12.36□□□□□ -0.43
LMX1B-202ENST00000373474 UPK3AO75631 287 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 FCARP24071 287 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 FAM169BQ8N8A8 192 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 FLYWCH2Q96CP2 140 aaKnown RBP12.36□□□□□ -0.43
LMX1B-202ENST00000373474 RELBQ01201 579 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 ROM1Q03395 351 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF788Q6ZQV5 615 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 TMEM183AQ8IXX5 376 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 AQP3Q92482 292 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 MRGPRFQ96AM1 343 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 HIST1H4GQ99525 98 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 MGPP08493 103 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 MRPS11P82912 194 aaKnown RBP12.36□□□□□ -0.43
LMX1B-202ENST00000373474 CALHM1Q8IU99 346 aa12.36□□□□□ -0.43
LMX1B-202ENST00000373474 MRPS16Q9Y3D3 137 aaKnown RBP12.36□□□□□ -0.43
LMX1B-202ENST00000373474 C4orf51C9J302 202 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TSPAN13O95857 204 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CEACAM3P40198 252 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TMEM108Q6UXF1 575 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 LDLRAD3Q86YD5 345 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF502Q8TBZ5 544 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ABHD3Q8WU67 409 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
LMX1B-202ENST00000373474 WIPI2Q9Y4P8 454 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ERVH48-1M5A8F1 160 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 FHL5Q5TD97 284 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF660Q6AZW8 331 aaPredicted RBP12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TEPPQ6URK8 271 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CFHR5Q9BXR6 569 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 UBTD1Q9HAC8 227 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CDIPTO14735 213 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 MFAP2P55001 183 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 C3AR1Q16581 482 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 UNQ9370/PRO34162Q6UXP9 181 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TMEM208Q9BTX3 173 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CHRNA10Q9GZZ6 450 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CA11O75493 328 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 MESP2Q0VG99 397 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 NPTNQ9Y639 398 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 HLA-DRB1P01911 266 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 AMY1AP04745 511 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ARL6IP6Q8N6S5 226 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF385AQ96PM9 386 aaKnown RBP12.35□□□□□ -0.43
LMX1B-202ENST00000373474 HES7Q9BYE0 225 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 DUSP15Q9H1R2 295 aaPredicted RBP12.35□□□□□ -0.43
LMX1B-202ENST00000373474 TREM2Q9NZC2 230 aa12.35□□□□□ -0.43
LMX1B-202ENST00000373474 B4E171 279 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 CCL4P13236 92 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 ABHD14AQ9BUJ0 271 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 ZNF638Q14966 1978 aaKnown RBP12.34□□□□□ -0.43
LMX1B-202ENST00000373474 RNF224P0DH78 156 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 SPINK2P20155 84 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 SOX8P57073 446 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 GUCD1Q96NT3 240 aa12.34□□□□□ -0.43
LMX1B-202ENST00000373474 IGLV1-36A0A0B4J1U3 117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms