RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 UCP2P55851 309 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 HERPUD1Q15011 391 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 WDR25Q64LD2 544 aaPredicted RBP10.02□□□□□ -0.81
VCL-202ENST00000372755 DDB2Q92466 427 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 CCL13Q99616 98 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 GPA33Q99795 319 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 CD160O95971 181 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 ADRA2AP08913 450 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
VCL-202ENST00000372755 TAS2R60P59551 318 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 FGF12P61328 243 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 ZNF645Q8N7E2 425 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 ZNF385AQ96PM9 386 aaKnown RBP10.02□□□□□ -0.81
VCL-202ENST00000372755 ST6GALNAC2Q9UJ37 374 aa10.02□□□□□ -0.81
VCL-202ENST00000372755 C5orf67F2Z3F1 127 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 TFF2Q03403 129 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 MMD2Q8IY49 270 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 MRPS18AQ9NVS2 196 aaKnown RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 HSPB7Q9UBY9 170 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 TMEM56-RWDD3S4R434 201 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 COL22A1Q8NFW1 1626 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 KBTBD11O94819 623 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 LAMTOR1Q6IAA8 161 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FSTP19883 344 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 PSG9Q00887 426 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 VAX1Q5SQQ9 334 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 SGMS2Q8NHU3 365 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM216AQ8WUB2 273 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 HDHD3Q9BSH5 251 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 TRBV5-3A0A0A0MS03 114 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 PTP4A3O75365 173 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 NTN1O95631 604 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 CCL8P80075 99 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 RAX2Q96IS3 184 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 ZNF488Q96MN9 340 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 ARID1BQ8NFD5 2236 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 PF4V1P10720 104 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 TFPI2P48307 235 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM214BQ7L5A3 538 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 RGP1Q92546 391 aaPredicted RBP10.01□□□□□ -0.81
VCL-202ENST00000372755 PLAC1Q9HBJ0 212 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 HILPDAQ9Y5L2 63 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A10PA6NDY2 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A18PA6NE21 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A16PA6NEW6 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A20PA6NIJ5 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A8PA6NJQ4 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A7PA6NKC0 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A22PA8MWA6 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A12PA8MX19 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A5PA8MXJ8 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A23PA8MXZ1 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 NDUFA2O43678 99 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A15PP0C7V4 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A13PP0C7W8 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A14PP0C7W9 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 FAM90A24PP0C7X0 464 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 EFNB2P52799 333 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 ZDHHC8Q9ULC8 765 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 HSF4Q9ULV5 492 aa10.01□□□□□ -0.81
VCL-202ENST00000372755 SPINT1O43278 529 aa10□□□□□ -0.81
VCL-202ENST00000372755 UPK3AO75631 287 aa10□□□□□ -0.81
VCL-202ENST00000372755 COMPP49747 757 aaPredicted RBP10□□□□□ -0.81
VCL-202ENST00000372755 PSG4Q00888 419 aa10□□□□□ -0.81
VCL-202ENST00000372755 TMEM91Q6ZNR0 172 aa10□□□□□ -0.81
VCL-202ENST00000372755 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
VCL-202ENST00000372755 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
VCL-202ENST00000372755 AHRRA9YTQ3 701 aa10□□□□□ -0.81
VCL-202ENST00000372755 FOXS1O43638 330 aa10□□□□□ -0.81
VCL-202ENST00000372755 PRSS8Q16651 343 aa10□□□□□ -0.81
VCL-202ENST00000372755 IBA57Q5T440 356 aaKnown RBP10□□□□□ -0.81
VCL-202ENST00000372755 ERASQ7Z444 233 aa10□□□□□ -0.81
VCL-202ENST00000372755 ELOVL1Q9BW60 279 aa10□□□□□ -0.81
VCL-202ENST00000372755 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
VCL-202ENST00000372755 LINC00869P0C866 280 aa10□□□□□ -0.81
VCL-202ENST00000372755 CKS2P33552 79 aa10□□□□□ -0.81
VCL-202ENST00000372755 OPN3Q9H1Y3 402 aaPredicted RBP10□□□□□ -0.81
VCL-202ENST00000372755 A0A1W2PPC1 479 aa10□□□□□ -0.81
VCL-202ENST00000372755 MPV17P39210 176 aa10□□□□□ -0.81
VCL-202ENST00000372755 NUBP1P53384 320 aa10□□□□□ -0.81
VCL-202ENST00000372755 RPL8P62917 257 aaKnown RBP10□□□□□ -0.81
VCL-202ENST00000372755 NSUN5P2Q63ZY6 315 aa10□□□□□ -0.81
VCL-202ENST00000372755 ZNF430Q9H8G1 570 aaPredicted RBP10□□□□□ -0.81
VCL-202ENST00000372755 FER1L6Q2WGJ9 1857 aa10□□□□□ -0.81
VCL-202ENST00000372755 K7ERU9 68 aa10□□□□□ -0.81
VCL-202ENST00000372755 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
VCL-202ENST00000372755 TUBD1Q9UJT1 453 aa10□□□□□ -0.81
VCL-202ENST00000372755 CCL27Q9Y4X3 112 aa10□□□□□ -0.81
VCL-202ENST00000372755 MRPS18BQ9Y676 258 aaKnown RBP10□□□□□ -0.81
VCL-202ENST00000372755 A0A0J9YW62 118 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
VCL-202ENST00000372755 PLA2G10O15496 165 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms