RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 EPHA8P29322 1005 aaPredicted RBP10.21□□□□□ -0.78
PTPN1-201ENST00000371621 DEFB103AP81534 67 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 Q6ZSR6 202 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 TGIF2LYQ8IUE0 185 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 P2RX4Q99571 388 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 SLC17A4Q9Y2C5 497 aa10.21□□□□□ -0.78
PTPN1-201ENST00000371621 SH2D1BO14796 132 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 APCSP02743 223 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 IL11P20809 199 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 PPP1CAP62136 330 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 RAB35Q15286 201 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 QTRT1Q9BXR0 403 aaKnown RBP10.2□□□□□ -0.78
PTPN1-201ENST00000371621 HCFC2Q9Y5Z7 792 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 FSTP19883 344 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 HOXC8P31273 242 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 BMI1P35226 326 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 PLP2Q04941 152 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 CATR1Q13166 79 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 SHISA5Q8N114 240 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 NHLRC2Q8NBF2 726 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 ZNF764Q96H86 408 aaPredicted RBP10.2□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM74BQ9NUR3 256 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 HILPDAQ9Y5L2 63 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM14DPA8MWL7 114 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 H3BUT2 72 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 PLPP3O14495 311 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 ZIC3O60481 467 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 ZNF217O75362 1048 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM52BQ4KMG9 183 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 LYG1Q8N1E2 194 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 PP6455Q8WZ26 134 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 LRRC3BQ96PB8 259 aa10.2□□□□□ -0.78
PTPN1-201ENST00000371621 A6NCN8 305 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SERF2P84101 59 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 RUNX3Q13761 415 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 PRAMEF5Q5TYX0 476 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 PRAMEF6Q5VXH4 476 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 STPG3Q8N7X2 389 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 COX11Q9Y6N1 276 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 CEACAM5P06731 702 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 APOBEC3DQ96AK3 386 aaPredicted RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SFRP2Q96HF1 295 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 ALKBH3Q96Q83 286 aaPredicted RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 CUTCQ9NTM9 273 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 PEF1Q9UBV8 284 aaKnown RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 TCFL5Q9UL49 500 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 GREB1Q4ZG55 1949 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 WDR81Q562E7 1941 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SERTM2A0A1B0GWG4 89 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 C5orf49A4QMS7 147 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 PDCD6O75340 191 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 CA2P00918 260 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SELENOTP62341 195 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 ACSF3Q4G176 576 aaPredicted RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 MRPL43Q8N983 215 aaKnown RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SLC37A2Q8TED4 501 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM171Q8WVE6 324 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 CLDN23Q96B33 292 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 SSBP3Q9BWW4 388 aaPredicted RBP10.19□□□□□ -0.78
PTPN1-201ENST00000371621 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
PTPN1-201ENST00000371621 DHRS3O75911 302 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 IGHV3-13P01766 116 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 IGHV3-7P01780 117 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ASAH2BP0C7U1 165 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 UBE2G1P62253 170 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ZNF141Q15928 474 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ZDHHC23Q8IYP9 409 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 WFDC12Q8WWY7 111 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 VSTM2LQ96N03 204 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 GABRG3Q99928 467 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 AICDAQ9GZX7 198 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM222Q9H0R3 208 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 GLRX2Q9NS18 164 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 IGKV1D-42A0A075B6H8 117 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 SLC22A20A6NK97 555 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 NMUP48645 174 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 LHX2P50458 406 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 C17orf67Q0P5P2 114 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 SFTPA1Q8IWL2 248 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 MMD2Q8IY49 270 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM106CQ9BVX2 250 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 ABI3Q9P2A4 366 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 GNG12Q9UBI6 72 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 F11RQ9Y624 299 aaKnown RBP10.18□□□□□ -0.78
PTPN1-201ENST00000371621 A6NDN8 102 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 GZMHP20718 246 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 CDKN1BP46527 198 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 TMEM186Q96B77 213 aa10.18□□□□□ -0.78
PTPN1-201ENST00000371621 KLHDC7BQ96G42 594 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms