RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 GNB3P16520 340 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 COX7A1P24310 79 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 CBX3Q13185 183 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 ACTBL2Q562R1 376 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 PRAMEF5Q5TYX0 476 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 OR52W1Q6IF63 320 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 FAAP20Q6NZ36 180 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 RTN4RL2Q86UN3 420 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
PFDN4-201ENST00000371419 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 OR4K15Q8NH41 348 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 GINS4Q9BRT9 223 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 LINC00574Q9H8X3 128 aa13□□□□□ -0.33
PFDN4-201ENST00000371419 RANGRFQ9HD47 186 aaPredicted RBP13□□□□□ -0.33
PFDN4-201ENST00000371419 SNRPGP15A8MWD9 76 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 MFNGO00587 321 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 NPFFO15130 113 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 AMY2AP04746 511 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 OMGP23515 440 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 SSTR5P35346 364 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 RNASE10Q5GAN6 216 aaKnown RBP12.99□□□□□ -0.33
PFDN4-201ENST00000371419 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 TRAT1Q6PIZ9 186 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 GLDNQ6ZMI3 551 aaPredicted RBP12.99□□□□□ -0.33
PFDN4-201ENST00000371419 PNKDQ8N490 385 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 OR51S1Q8NGJ8 323 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
PFDN4-201ENST00000371419 SLC6A7Q99884 636 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 PRRT1Q99946 306 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 TMEM133Q9H2Q1 129 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 RIMS4Q9H426 269 aaPredicted RBP12.99□□□□□ -0.33
PFDN4-201ENST00000371419 AK3Q9UIJ7 227 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 BOLA1Q9Y3E2 137 aa12.99□□□□□ -0.33
PFDN4-201ENST00000371419 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 SERPINE3A8MV23 424 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 NPIPB11E5RHQ5 1161 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 NAPSAO96009 420 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 NAT1P18440 290 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 RCC1P18754 421 aaPredicted RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 ARFRP1Q13795 201 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 FCN2Q15485 313 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 ZBTB8BQ8NAP8 495 aaPredicted RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 OR10A7Q8NGE5 316 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 OR4D10Q8NGI6 311 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 NUDCD2Q8WVJ2 157 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 ARL11Q969Q4 196 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 KIRREL1Q96J84 757 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 SUCNR1Q9BXA5 334 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 CHMP1AQ9HD42 196 aaPredicted RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 RAB9BQ9NP90 201 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 MBNL3Q9NUK0 354 aaKnown RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 SLC2A8Q9NY64 477 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 IDI2-AS1Q9NZ38 188 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 ELF5Q9UKW6 265 aaPredicted RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 ANAPC10Q9UM13 185 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 SOX21Q9Y651 276 aaPredicted RBP12.98□□□□□ -0.33
PFDN4-201ENST00000371419 CUBNO60494 3623 aa12.98□□□□□ -0.33
PFDN4-201ENST00000371419 C15orf65H3BRN8 121 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SSNA1O43805 119 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SSX5O60225 188 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 MIDNQ504T8 468 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 OR11H6Q8NGC7 330 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 FYTTD1Q96QD9 318 aaKnown RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 ALX4Q9H161 411 aaPredicted RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 C12orf4Q9NQ89 552 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 KCNIP1Q9NZI2 227 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 KCNK7Q9Y2U2 307 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 TRBV6-6A0A0A6YYG2 114 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 IGHV2-26A0A0B4J1V2 119 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SPINT2O43291 252 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 CREBL2O60519 120 aaPredicted RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 C1QBP02746 253 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 ZNF735P0CB33 412 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SULT1A3P0DMM9 295 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SULT1A4P0DMN0 295 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 NFYBP25208 207 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 SAA4P35542 130 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 MRPS15P82914 257 aaKnown RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 RBMS3Q6XE24 437 aaKnown RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 IDO2Q6ZQW0 420 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 ABHD12Q8N2K0 398 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
PFDN4-201ENST00000371419 TINAGL1Q9GZM7 467 aaPredicted RBP12.97□□□□□ -0.33
PFDN4-201ENST00000371419 A0A087X0M5 115 aa12.96□□□□□ -0.34
PFDN4-201ENST00000371419 A0A0U1RQK1 487 aa12.96□□□□□ -0.34
PFDN4-201ENST00000371419 A0A1B0GX30 115 aa12.96□□□□□ -0.34
PFDN4-201ENST00000371419 POM121CA8CG34 1229 aa12.96□□□□□ -0.34
PFDN4-201ENST00000371419 M0QYG6 137 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms