RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
TPM3-213ENST00000368545 TUBAL3A6NHL2 446 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 OR2AT4A6NND4 320 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SRRM5B3KS81 715 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SHISA9B4DS77 424 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SLC33A1O00400 549 aaPredicted RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 SPRY3O43610 288 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 HAND1O96004 215 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 ZFP36P26651 326 aaKnown RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 KCNJ3P48549 501 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 UBE2MP61081 183 aaKnown RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 TNFAIP6P98066 277 aaPredicted RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 CD300CQ08708 224 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 PAN3Q58A45 887 aaKnown RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 ZNF826PQ6ZT77 177 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 TCTE3Q8IZS6 198 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 LRRC29Q8WV35 223 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 CYYR1Q96J86 154 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 ST6GAL2Q96JF0 529 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 BEX2Q9BXY8 128 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SEBOXQ9HB31 216 aaPredicted RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 BEX1Q9HBH7 125 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 Q9N2K0 584 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 DCAF16Q9NXF7 216 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 VSIG4Q9Y279 399 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 PLCE1Q9P212 2302 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 IGKV1D-8A0A087WSZ0 117 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 IGHV3-64DA0A0J9YX35 117 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 HSPB6O14558 160 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 HS3ST1O14792 307 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 CD55P08174 381 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 HOXB5P09067 269 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 OR4E1P0C645 316 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 OR5H8P0DN80 308 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 LMO1P25800 156 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 GLP1RP43220 463 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 Q71RC1 249 aaPredicted RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 TMED4Q7Z7H5 227 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SLC25A42Q86VD7 318 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 ITLN1Q8WWA0 313 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 RDH5Q92781 318 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 CORO2AQ92828 525 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 MRGPRFQ96AM1 343 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 DHRS9Q9BPW9 319 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 SEC22CQ9BRL7 303 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 RNF115Q9Y4L5 304 aa7.28□□□□□ -1.24
TPM3-213ENST00000368545 DIDO1Q9BTC0 2240 aaKnown RBP7.28□□□□□ -1.24
TPM3-213ENST00000368545 M0R233 179 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SDCBPO00560 298 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 PHF1O43189 567 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 SLC25A17O43808 307 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 CTXN2P0C2S0 81 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SULT1A3P0DMM9 295 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SULT1A4P0DMN0 295 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ANXA3P12429 323 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 EIF2B2P49770 351 aaKnown RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 FCN2Q15485 313 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 AADACL3Q5VUY0 350 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 DHRS11Q6UWP2 260 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 PEG10Q86TG7 708 aaKnown RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 TBC1D26Q86UD7 250 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 TMEM185AQ8NFB2 350 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 MRPL30Q8TCC3 161 aaKnown RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 Q8TCH9 128 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 MARCH1Q8TCQ1 289 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZNF431Q8TF32 576 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 TMEM68Q96MH6 324 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ATP6V0BQ99437 205 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZNF2Q9BSG1 426 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 TRAF4Q9BUZ4 470 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 WDR13Q9H1Z4 485 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 OR14J1Q9UGF5 321 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 GPR132Q9UNW8 380 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 LSM4Q9Y4Z0 139 aaKnown RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 CCDC168Q8NDH2 2452 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 TRDCB7Z8K6 153 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SIRPB1O00241 398 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 WNT9BO14905 357 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 HLA-AP01891 365 aaKnown RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 GMFBP60983 142 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 HLA-DRB3P79483 266 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 EFNB3Q15768 340 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ANXA2RQ3ZCQ2 193 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZFP69Q49AA0 526 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 PDLIM3Q53GG5 364 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 TMEM128Q5BJH2 165 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZNF660Q6AZW8 331 aaPredicted RBP7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZNF880Q6PDB4 577 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 Q6ZPA2 131 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 GAPTQ8N292 157 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SPICQ8N5J4 248 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 OR11L1Q8NGX0 322 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 LINC01560Q8TB33 94 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 SMR3AQ99954 134 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 EGLN1Q9GZT9 426 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 DKK2Q9UBU2 259 aa7.27□□□□□ -1.25
TPM3-213ENST00000368545 C14orf166Q9Y224 244 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms