RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DLL1O00548 723 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 FGF12P61328 243 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 PPP1R32Q7Z5V6 425 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 OR1L6Q8NGR2 347 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 RTN4RQ9BZR6 473 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 DOCK3Q8IZD9 2030 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 TGOLN2O43493 480 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 RAMP1O60894 148 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 PRSS1P07477 247 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 ACSF3Q4G176 576 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-207ENST00000368226 VWA1Q6PCB0 445 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 LDLRAD3Q86YD5 345 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 OR2D3Q8NGH3 330 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 MFNGO00587 321 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 MPV17P39210 176 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 AWAT1Q58HT5 328 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF596Q8TC21 504 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 RNF115Q9Y4L5 304 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 SCN2AQ99250 2005 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 IGLV1-36A0A0B4J1U3 117 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 CD1BP29016 333 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 RAG2P55895 527 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 FAM27E3Q08E93 113 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 CCDC144NLQ6NUI1 221 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 MRGPRGQ86SM5 289 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 TIMP4Q99727 224 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 PRDM14Q9GZV8 571 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 A0A0U1RQV5 110 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 MGST3O14880 152 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 TOLLIPQ9H0E2 274 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF552Q9H707 407 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-207ENST00000368226 MANBALQ9NQG1 85 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 RALYQ9UKM9 306 aaKnown RBP11.12□□□□□ -0.63
PTPRK-207ENST00000368226 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
PTPRK-207ENST00000368226 M0R2Z0 102 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 TMEM105Q8N8V8 129 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 NPBWR2P48146 333 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 FHL5Q5TD97 284 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 OR8G5Q8NG78 346 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 IL36RNQ9UBH0 155 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 IGKV1D-42A0A075B6H8 117 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 LOC389332A0A1B0GUA5 103 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 GAPDHP04406 335 aaKnown RBP11.11□□□□□ -0.63
PTPRK-207ENST00000368226 SLC35B1P78383 322 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 DLK1P80370 383 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF658BQ4V348 819 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-207ENST00000368226 NUBP1P53384 320 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 CRYBA2P53672 197 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
PTPRK-207ENST00000368226 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 PPIAL4CA0A0B4J2A2 164 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 TEX50A0A1B0GTY4 177 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 A0A1B0GU03 582 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 SLC25A17O43808 307 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-207ENST00000368226 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 KHDC3LQ587J8 217 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 OPN4Q9UHM6 478 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 RGS13O14921 159 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 FAM106CPP0CH98 169 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 RPL27AP46776 148 aaKnown RBP11.1□□□□□ -0.63
PTPRK-207ENST00000368226 ROM1Q03395 351 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 TMEM97Q5BJF2 176 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 MUC15Q8N387 334 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 HMSDA8MTL9 139 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 H3BTX0 84 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 HPRT1P00492 218 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 VSIG10L2P0DP72 767 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 FAM201AQ5SY85 155 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 RSG1Q9BU20 258 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 HELTA6NFD8 242 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 CEACAM18A8MTB9 384 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-207ENST00000368226 SMIM10L1P0DMW3 83 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 RPL13AP40429 203 aaKnown RBP11.1□□□□□ -0.63
PTPRK-207ENST00000368226 NCMAPQ5T1S8 102 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF841Q6ZN19 808 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 CBLN2Q8IUK8 224 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 SMIM10Q96HG1 83 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 GHITMQ9H3K2 345 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 WNT9BO14905 357 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms