RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 C14orf144Q96I85 54 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 SIGLEC12Q96PQ1 595 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 ADGRL4Q9HBW9 690 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 FUT9Q9Y231 359 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 A0A0G2JLM5 398 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 OR2T8A6NH00 312 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 COX7A2P2O60397 106 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 SS18L1O75177 396 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-206ENST00000367253 FGF5P12034 268 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 SSX1Q16384 188 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 FAAP20Q6NZ36 180 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 GLDNQ6ZMI3 551 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-206ENST00000367253 BCDIN3DQ7Z5W3 292 aaKnown RBP7.58□□□□□ -1.2
SYNE1-206ENST00000367253 SGMS2Q8NHU3 365 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 NTNG2Q96CW9 530 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 MAGT1Q9H0U3 335 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 EDA2RQ9HAV5 297 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 IL36GQ9NZH8 169 aa7.58□□□□□ -1.2
SYNE1-206ENST00000367253 PLEKHB1Q9UF11 243 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-206ENST00000367253 ZDBF2Q9HCK1 2354 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SPINK4O60575 86 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 GNG4P50150 75 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 DLK1P80370 383 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 ELFN2Q5R3F8 820 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 OR52N4Q8NGI2 321 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 ST6GAL2Q96JF0 529 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 KCNK15Q9H427 330 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 TNFSF18Q9UNG2 199 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LOC105371242A0A075B767 164 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 FCGR3AP08637 254 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 VSIG10L2P0DP72 767 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 B4GALT1P15291 398 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PI3P19957 117 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 DLX1P56177 255 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 IFITM2Q01629 132 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SLC25A34Q6PIV7 304 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 STAC2Q6ZMT1 411 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 FAM57AQ8TBR7 257 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SPSB1Q96BD6 273 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LINC00615Q96LM1 132 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 MPC1Q9Y5U8 109 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SDCBPO00560 298 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PPP6CO00743 305 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SYNGR3O43761 229 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 NDUFC2O95298 119 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 ESDP10768 282 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CAMPP49913 170 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CTU2Q2VPK5 515 aaKnown RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 Q6ZSR9 355 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LINC00346Q8IVM7 164 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 OR13A1Q8NGR1 328 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CCL4L1Q8NHW4 92 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 ATOH8Q96SQ7 321 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CXorf36Q9H7Y0 433 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PIPOXQ9P0Z9 390 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 RCL1Q9Y2P8 373 aaKnown RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 IFITM5A6NNB3 132 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 ICOSLGO75144 302 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 HIST1H1DP16402 221 aaKnown RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 GNLYP22749 145 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 OTX1P32242 354 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LIMS1P48059 325 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PITX1P78337 314 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PAX2Q02962 417 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 UBE2V1Q13404 147 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PCOLCEQ15113 449 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 PNLIPRP3Q17RR3 467 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 BSXQ3C1V8 233 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CCSMST1Q4G0I0 132 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 LIAT1Q6ZQX7 453 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 RTN4RQ9BZR6 473 aa7.57□□□□□ -1.2
SYNE1-206ENST00000367253 MBNL3Q9NUK0 354 aaKnown RBP7.57□□□□□ -1.2
SYNE1-206ENST00000367253 CORTO00230 105 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 RBFOX2O43251 390 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 RPS4Y1P22090 263 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 CTGFP29279 349 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 HRH1P35367 487 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 CCR2P41597 374 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 METAP1P53582 386 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 PFN3P60673 137 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 PMVKQ15126 192 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 TM4SF20Q53R12 229 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ANKRD39Q53RE8 183 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ARHGEF39Q8N4T4 335 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 FAM89BQ8N5H3 189 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 ANKRD29Q8N6D5 301 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 SLC16A11Q8NCK7 471 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 Q8WTZ3 238 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 SLC45A2Q9UMX9 530 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 COL11A1P12107 1806 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 SPTBN1Q01082 2364 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE12JA6NER3 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GDF9O60383 454 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 GAGE7O76087 117 aa7.56□□□□□ -1.2
SYNE1-206ENST00000367253 TRGC2P03986 189 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms