RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 OR2A4O95047 310 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 SFT2D2O95562 160 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 DUS4LO95620 317 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 HLA-AP01891 365 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 GIPP09681 153 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 ZNF728P0DKX0 622 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 MUC1P15941 1255 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 AKR1C4P17516 323 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 HLA-GP17693 338 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 RCC1P18754 421 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 CD34P28906 385 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 HERV-K104P61576 105 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 IL13RA1P78552 427 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 ATXN7L3Q14CW9 347 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 HERPUD1Q15011 391 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 TEX36Q5VZQ5 186 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 LPCAT3Q6P1A2 487 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 NOXA1Q86UR1 476 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 SLC38A6Q8IZM9 456 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 ANGPTL6Q8NI99 470 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 ZNF486Q96H40 463 aaPredicted RBP9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 DMRTB1Q96MA1 342 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 OR2A7Q96R45 310 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 DYNLRB1Q9NP97 96 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 SLC23A1Q9UHI7 598 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 SHPKQ9UHJ6 478 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 IGKV1-6A0A0C4DH72 117 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 OOEPA6NGQ2 149 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 MGST3O14880 152 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 PPYP01298 95 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 RPS2P15880 293 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 AADACP22760 399 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 ERP29P30040 261 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 CCL8P80075 99 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 BAMBIQ13145 260 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 STUMQ69YW2 141 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 C11orf88Q6PI97 169 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 NLRC3Q7RTR2 1065 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 C1orf87Q8N0U7 546 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNF561Q8N587 486 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 BOLLQ8N9W6 283 aaKnown RBP9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 SDSLQ96GA7 329 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 COQ2Q96H96 371 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 PHB2Q99623 299 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 RSRP1Q9BUV0 290 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 TMPRSS13Q9BYE2 586 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 RANBP3Q9H6Z4 567 aaPredicted RBP9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 SAP30LQ9HAJ7 183 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 KCNIP1Q9NZI2 227 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 PIPOXQ9P0Z9 390 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 OPN4Q9UHM6 478 aa9.27□□□□□ -0.93
CSNK1E-202ENST00000366216 TANC2Q9HCD6 1990 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 IGHV3OR15-7A0A075B7D8 119 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 TRAV20A0A0B4J274 112 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 K7N7A8 449 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 BET1O15155 118 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 SLC22A5O76082 557 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 CYB5R3P00387 301 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 PI3P19957 117 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 NFYAP23511 347 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 VAMP1P23763 118 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 CD80P33681 288 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 GABRA2P47869 451 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 RAP2BP61225 183 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 SUPT4H1P63272 117 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 AESQ08117 197 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 SRSF4Q08170 494 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 FBLN7Q53RD9 439 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 KRBOX4Q5JUW0 171 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 C6orf183Q5T699 404 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 H1FOOQ8IZA3 346 aaPredicted RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 FAM185AQ8N0U4 392 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 ASCC1Q8N9N2 400 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 UXS1Q8NBZ7 420 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 OR5T2Q8NGG2 359 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 OR10J5Q8NHC4 309 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 CLDND2Q8NHS1 167 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 TAF15Q92804 592 aaKnown RBP eCLIP9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 HYLS1Q96M11 299 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 TOLLIPQ9H0E2 274 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 FAM234AQ9H0X4 552 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 DNTTIP1Q9H147 329 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 NARFLQ9H6Q4 476 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 KIF25Q9UIL4 384 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 PPIAL4AQ9Y536 164 aa9.26□□□□□ -0.93
CSNK1E-202ENST00000366216 DOCK11Q5JSL3 2073 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 TRAV38-1A0A0B4J264 116 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 DBX1A6NMT0 343 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 TMEM178BH3BS89 294 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 LGALS8O00214 317 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 GOSR2O14653 212 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 RGS11O94810 467 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNF205O95201 554 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 FXYD4P59646 89 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms