RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 RPS23P62266 143 aaKnown RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 SPINK9Q5DT21 86 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C11orf88Q6PI97 169 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C19orf35Q6ZS72 473 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 VKORC1L1Q8N0U8 176 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ZNF525Q8N782 197 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MED30Q96HR3 178 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 RBM7Q9Y580 266 aaKnown RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 DIDO1Q9BTC0 2240 aaKnown RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 OOEPA6NGQ2 149 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 PRSS44E7EML9 344 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 RAMP3O60896 148 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TRAPPC2P0DI81 140 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TRAPPC2BP0DI82 140 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ANXA3P12429 323 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 F2RP25116 425 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SELENOVP59797 346 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 Q3ZCU0 254 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 FAM74A1Q5RGS3 127 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SLC35G3Q8N808 338 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C15orf40Q8WUR7 153 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 GPR146Q96CH1 333 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TECTBQ96PL2 329 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 DHRS9Q9BPW9 319 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 IFI27L2Q9H2X8 130 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MS4A5Q9H3V2 200 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MMP26Q9NRE1 261 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 CALYQ9NYX4 217 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 GNG12Q9UBI6 72 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C5orf51A6NDU8 294 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SIGLEC5O15389 551 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 EPHA1P21709 976 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SMIM21Q3B7S5 101 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 LINC01600Q96MT4 127 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SMIM3Q9BZL3 60 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OR2D2Q9H210 308 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SIRT7Q9NRC8 400 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 PLA2G2EQ9NZK7 142 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 COPZ2Q9P299 210 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OR2W1Q9Y3N9 320 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 EXPH5Q8NEV8 1989 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MTORP42345 2549 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TMEM30CPA0ZSE6 113 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 POM121CA8CG34 1229 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ACAA1P09110 424 aaPredicted RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 RRASP10301 218 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 AGAP20933 346 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 POLR2GP62487 172 aaKnown RBP eCLIP2.35□□□□□ -2.03
LTN1-201ENST00000361371 ARL6IP1Q15041 203 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TMEM200BQ69YZ2 307 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TCTE3Q8IZS6 198 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ZDHHC22Q8N966 263 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OR10Z1Q8NGY1 313 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ERGIC1Q969X5 290 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SNX22Q96L94 193 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 CABLES2Q9BTV7 478 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 PLEKHF2Q9H8W4 249 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SNRPGP15A8MWD9 76 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 NPIPB11E5RHQ5 1161 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MPPED1O15442 326 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SCGNO76038 276 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OR2F2O95006 317 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 CD55P08174 381 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TAS2R46P59540 309 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SSBP1Q04837 148 aaKnown RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 KLRD1Q13241 179 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 EFNB3Q15768 340 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SHEQ5VZ18 495 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 DEDD2Q8WXF8 326 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 CLEC4MQ9H2X3 399 aaPredicted RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 PCDHB16Q9NRJ7 776 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 KCNS2Q9ULS6 477 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 KIR2DS1A0A191URI9 304 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C3orf85A0A1B0GTC6 90 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 TMEM8BA6NDV4 472 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 CRYM-AS1A6NIL9 109 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 PRAF2O60831 178 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 KRASP01116 189 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OPN1MWP04001 364 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OPN1MW2P0DN77 364 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 OPN1MW3P0DN78 364 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 KIR2DS4P43632 304 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 HERV-K104P61576 105 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ARF6P62330 175 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ZNF816Q0VGE8 651 aaPredicted RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 KIR2DS1Q14954 304 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 C10orf55Q5SWW7 151 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 SSX9Q7RTT3 188 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 FAM185AQ8N0U4 392 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 DYNAPQ8N1N2 210 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 ZNF439Q8NDP4 499 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 RITA1Q96K30 269 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 NAA60Q9H7X0 242 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 MYOZ1Q9NP98 299 aaPredicted RBP2.35□□□□□ -2.03
LTN1-201ENST00000361371 SDHAF2Q9NX18 166 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 EDARQ9UNE0 448 aa2.35□□□□□ -2.03
LTN1-201ENST00000361371 IGHV3OR16-10A0A075B7F0 116 aa2.34□□□□□ -2.03
LTN1-201ENST00000361371 TRBV6-6A0A0A6YYG2 114 aa2.34□□□□□ -2.03
LTN1-201ENST00000361371 B9A039 149 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms