RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 IGHV1-69-2A0A0G2JMI3 117 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ZNF729A6NN14 1252 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 DEFB108AA8MXU0 73 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 C12orf77C9JDV5 145 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 C3orf80F5H4A9 247 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 RGS13O14921 159 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 SIGLEC5O15389 551 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 NDUFB3O43676 98 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 OR2F2O95006 317 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 SIX6O95475 246 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 CDS2O95674 445 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 CYB5R3P00387 301 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 IFNA7P01567 189 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 HBZP02008 142 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 OR5AC1P0C628 307 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 RPS2P15880 293 aaKnown RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 EGR1P18146 543 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 PVALBP20472 110 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 GNRHRP30968 328 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 CD80P33681 288 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 CEBPDP49716 269 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 EDDM3BP56851 147 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 MRPS11P82912 194 aaKnown RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 OR2F1Q13607 317 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 EDDM3AQ14507 147 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ZNF345Q14585 488 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 HERPUD1Q15011 391 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 THOC7Q6I9Y2 204 aaKnown RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 C11orf87Q6NUJ2 197 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 C20orf204Q6ZNR8 217 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ZNF788Q6ZQV5 615 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 TBC1D26Q86UD7 250 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ZNF645Q8N7E2 425 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 CCL17Q92583 94 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 TIMD4Q96H15 378 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 SHARPINQ9H0F6 387 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 OR2S2Q9NQN1 319 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 FAM212BQ9NTI7 297 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 KCNS2Q9ULS6 477 aa8.97□□□□□ -0.97
TRAPPC4-201ENST00000359005 SMLR1H3BR10 107 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 ITGB1BP1O14713 200 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 HSD17B6O14756 317 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 YPEL1O60688 119 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 RP2O75695 350 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 HOXB5P09067 269 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 F2RP25116 425 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 LOXP28300 417 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 S100A11P31949 105 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 GLIPR1P48060 266 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 EIF5AP63241 154 aaKnown RBP8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 TMEM187Q14656 261 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 IAH1Q2TAA2 248 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 ANKRD55Q3KP44 614 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 LY6G6FQ5SQ64 297 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 ZNF818PQ6ZRF7 136 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 ACOT7LQ6ZUV0 252 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 LDLRAD3Q86YD5 345 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 KRTAP1-3Q8IUG1 177 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 OR52M1Q8NGK5 317 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 CD300LFQ8TDQ1 290 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 MRGPRDQ8TDS7 321 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 PPP1R1CQ8WVI7 109 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 COQ2Q96H96 371 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 TMEM56Q96MV1 263 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 YPEL2Q96QA6 119 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 MFFQ9GZY8 342 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 TAS2R3Q9NYW6 316 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 GNG12Q9UBI6 72 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 CACFD1Q9UGQ2 172 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 TMEM56-RWDD3S4R434 201 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 DNHD1Q96M86 4753 aa8.96□□□□□ -0.98
TRAPPC4-201ENST00000359005 IGHV3OR15-7A0A075B7D8 119 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 IGKV1-6A0A0C4DH72 117 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 A0A1B0GW55 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 KANTRA0A1W2PQU2 76 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 TMPRSS2O15393 492 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 ARPC5O15511 151 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 MPC2O95563 127 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L2P0CJ85 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L3P0CJ86 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L4P0CJ87 422 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L5P0CJ88 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L6P0CJ89 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DUX4L7P0CJ90 424 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 VDAC1P21796 283 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 RAB14P61106 215 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 GNMTQ14749 295 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 Q3ZCU0 254 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 DCAF12L2Q5VW00 463 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 ZNF66Q6ZN08 573 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 RNASE11Q8TAA1 199 aaKnown RBP8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 CORO2AQ92828 525 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 RAB1CQ92928 201 aa8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 RBPMSQ93062 196 aaKnown RBP8.95□□□□□ -0.98
TRAPPC4-201ENST00000359005 SEC22AQ96IW7 307 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms