RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 H0Y980 276 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 CSN3P07498 182 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 HOXD4P09016 255 aaPredicted RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 Q56UQ5 140 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 INO80CQ6PI98 192 aaPredicted RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 ABHD14BQ96IU4 210 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 LYRM2Q9NU23 88 aaPredicted RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 FAM157AC9JC47 383 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 IER3P46695 156 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
VCP-201ENST00000358901 SPSB2Q99619 263 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 IER2Q9BTL4 223 aa11.86□□□□□ -0.51
VCP-201ENST00000358901 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
VCP-201ENST00000358901 RBBP6Q7Z6E9 1792 aaKnown RBP11.85□□□□□ -0.51
VCP-201ENST00000358901 M0R143 59 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 ZNF708P17019 499 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 S100A4P26447 101 aaKnown RBP11.85□□□□□ -0.51
VCP-201ENST00000358901 HOXA6P31267 233 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 LYZP61626 148 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 TNXAQ16473 311 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 HLA-DRB5Q30154 266 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 LINC00596Q86U02 117 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 IGHV3OR15-7A0A075B7D8 119 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 A0A087WV48 116 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 IGHV1-45A0A0A0MS14 117 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 HELTA6NFD8 242 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 SNURFLB1AK76 121 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 PDE6DO43924 150 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 NPBWR2P48146 333 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 MEF2BQ02080 365 aaPredicted RBP11.85□□□□□ -0.51
VCP-201ENST00000358901 HIST3H3Q16695 136 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 PMS2CLQ68D20 193 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 PDPNQ86YL7 162 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 OR52L2PQ8NGH6 319 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 OR2J3O76001 311 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 BTCP35070 178 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 HARBI1Q96MB7 349 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 LCTP09848 1927 aa11.85□□□□□ -0.51
VCP-201ENST00000358901 CBY3A6NI87 242 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 LRRC3CA6NJW4 275 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 TIAF1O95411 115 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 CD1BP29016 333 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 MEGF10Q96KG7 1140 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
VCP-201ENST00000358901 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
VCP-201ENST00000358901 SNRPCP09234 159 aaKnown RBP11.84□□□□□ -0.51
VCP-201ENST00000358901 RND3P61587 244 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 NHLH1Q02575 133 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RIPPLY2Q5TAB7 128 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RALGAPA1Q6GYQ0 2036 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 ZNF826PQ6ZT77 177 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 POC1AQ8NBT0 407 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 SOSTQ9BQB4 213 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 CLDN14O95500 239 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 HBZP02008 142 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 LRRC75AQ8NAA5 344 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RND1Q92730 232 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RARRES2Q99969 163 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 PRNDQ9UKY0 176 aa11.84□□□□□ -0.51
VCP-201ENST00000358901 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
VCP-201ENST00000358901 NPIPB13A6NJU9 1138 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 NPIPB4C9JG80 1138 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 J3QR06 171 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 PPIHO43447 177 aaKnown RBP11.83□□□□□ -0.51
VCP-201ENST00000358901 OR2H2O95918 312 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 HSPB1P04792 205 aaKnown RBP11.83□□□□□ -0.51
VCP-201ENST00000358901 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.51
VCP-201ENST00000358901 PRDX2P32119 198 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 FGFRL1Q8N441 504 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 OR5AU1Q8NGC0 362 aa11.83□□□□□ -0.51
VCP-201ENST00000358901 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.51
VCP-201ENST00000358901 A0A1W2PR77 199 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 FOXC1Q12948 553 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 Q6ZN92 141 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 GMPPAQ96IJ6 420 aaPredicted RBP11.83□□□□□ -0.52
VCP-201ENST00000358901 RHOVQ96L33 236 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 SAP30LQ9HAJ7 183 aa11.83□□□□□ -0.52
VCP-201ENST00000358901 DLL3Q9NYJ7 618 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms