RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 LDLRAD3Q86YD5 345 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 LHFPL5Q8TAF8 219 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 GALNT14Q96FL9 552 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 SH2D2AQ9NP31 389 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 MPZP25189 248 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 RNF138Q8WVD3 245 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 SCAF4O95104 1147 aaKnown RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 CECR9P0C854 216 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 TNFAIP6P98066 277 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 RAB31Q13636 194 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 LRP4O75096 1905 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 RBMS3Q6XE24 437 aaKnown RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 FRZBQ92765 325 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 RFNGQ9Y644 331 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 GAPDHP04406 335 aaKnown RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
SIRPA-202ENST00000358771 ETV3LQ6ZN32 361 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 UBAC2Q8NBM4 344 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 OR4F5Q8NH21 305 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 OR4F4Q96R69 305 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 ARV1Q9H2C2 271 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
SIRPA-202ENST00000358771 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 A0A1W2PPE2 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A10PA6NDY2 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A18PA6NE21 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A16PA6NEW6 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A20PA6NIJ5 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A8PA6NJQ4 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A7PA6NKC0 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A22PA8MWA6 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A12PA8MX19 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A5PA8MXJ8 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A23PA8MXZ1 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A15PP0C7V4 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A13PP0C7W8 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A14PP0C7W9 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FAM90A24PP0C7X0 464 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FLI1Q01543 452 aaPredicted RBP12.1□□□□□ -0.47
SIRPA-202ENST00000358771 IL24Q13007 206 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 hCG_1809904A0A1W2PP81 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 A0A1W2PR64 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 A0A1W2PRV1 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 IGSF23A1L1A6 192 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 CD82P27701 267 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 PRDX2P32119 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 LYPD6Q86Y78 171 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 FGFRL1Q8N441 504 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 PKIBQ9C010 78 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 ATRXP46100 2492 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.474e-8■■■■■ 36.7
SIRPA-202ENST00000358771 A0A1W2PPH5 198 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 LRRC30A6NM36 301 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 H0Y980 276 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 HNF1AP20823 631 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 PSMB3P49720 205 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 NDUFA6P56556 154 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 RPP30P78346 268 aaKnown RBP12.1□□□□□ -0.47
SIRPA-202ENST00000358771 NRN1LQ496H8 165 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 ZNRF1Q8ND25 227 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 ATP5SQ99766 215 aa12.1□□□□□ -0.47
SIRPA-202ENST00000358771 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 MRPL30Q8TCC3 161 aaKnown RBP12.09□□□□□ -0.47
SIRPA-202ENST00000358771 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
SIRPA-202ENST00000358771 RARRES2Q99969 163 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 RAB9BQ9NP90 201 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 TRGV10A0A0A0MS01 117 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 PRSS44E7EML9 344 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 SULT1A1P50225 295 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 UCP3P55916 312 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 RBPJQ06330 500 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
SIRPA-202ENST00000358771 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 SMIM7Q9BQ49 75 aa12.09□□□□□ -0.47
SIRPA-202ENST00000358771 PRO3102Q9H379 93 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms