RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RBFOX1Q9NWB1 397 aaKnown RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 HSPB7Q9UBY9 170 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 IGHV5-51A0A0C4DH38 117 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 TMEM272A0A1B0GTI8 110 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 GABRG2P18507 467 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 YIPF6Q96EC8 236 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 TMEM160Q9NX00 188 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 PNLIPP16233 465 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 LINC00862A6NCI5 91 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 PRR19A6NJB7 356 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 MRPS14O60783 128 aaKnown RBP8.54□□□□□ -1.04
CHD3-202ENST00000358181 IGHV3-48P01763 117 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 SOD3P08294 240 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 CD99P14209 185 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 MPV17LQ2QL34 196 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 OR10J3Q5JRS4 329 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 FUNDC1Q8IVP5 155 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 MRGPRX3Q96LB0 322 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 J3QR06 171 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
CHD3-202ENST00000358181 SPRED2Q7Z698 418 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 C3orf56Q8N813 242 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 OR6X1Q8NH79 312 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 FGF11Q92914 225 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 SRD5A2P31213 254 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 CLDN20P56880 219 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 RAC3P60763 192 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 ACVR1Q04771 509 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 S100A7L2Q5SY68 101 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 Q71RC1 249 aaPredicted RBP8.54□□□□□ -1.04
CHD3-202ENST00000358181 CLEC7AQ9BXN2 247 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 FUT9Q9Y231 359 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 A0A1B0GTL3 188 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 S1PR2O95136 353 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 PTHLHP12272 177 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 RPL35AP18077 110 aaKnown RBP8.54□□□□□ -1.04
CHD3-202ENST00000358181 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 LEAP2Q969E1 77 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 CYB5R1Q9UHQ9 305 aa8.54□□□□□ -1.04
CHD3-202ENST00000358181 B4DEV8 164 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 ISL1P61371 349 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 POLR2GP62487 172 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD3-202ENST00000358181 EEF1AKMT3Q96AZ1 226 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 PSMG3Q9BT73 122 aaPredicted RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 SCN3AQ9NY46 2000 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 CEACAM18A8MTB9 384 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 SRD5A1P18405 259 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 RPL27AP46776 148 aaKnown RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 PEAR1Q5VY43 1037 aaPredicted RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 LAMB1P07942 1786 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 ZNF638Q14966 1978 aaKnown RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 NKX2-8O15522 239 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 MBTPS2O43462 519 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 GDF9O60383 454 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 HYPMO75409 117 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 CEACAM8P31997 349 aaPredicted RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 PRSS41Q7RTY9 318 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 AKAP11Q9UKA4 1901 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 DOCK5Q9H7D0 1870 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 PKD1L3Q7Z443 1732 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 OTOFQ9HC10 1997 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 LINC01387J3KSC0 135 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 M0R381 172 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 AMY1AP04745 511 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 GGTA1PQ4G0N0 100 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 FAM27D1Q5T7N8 215 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 PTP4A1Q93096 173 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 LOC390937A0A1W2PQ73 354 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 F8WEM9 126 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 ACAA1P09110 424 aaPredicted RBP8.53□□□□□ -1.04
CHD3-202ENST00000358181 DDOSTP39656 456 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 TEX30Q5JUR7 227 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 AFMIDQ63HM1 303 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 CLEC18BQ6UXF7 455 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 CADM3Q8N126 398 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 VSTM2LQ96N03 204 aa8.53□□□□□ -1.04
CHD3-202ENST00000358181 TRDV1A0A1B0GX56 115 aa8.52□□□□□ -1.04
CHD3-202ENST00000358181 NDUFS5O43920 106 aa8.52□□□□□ -1.04
CHD3-202ENST00000358181 IGHV3-11P01762 117 aa8.52□□□□□ -1.04
CHD3-202ENST00000358181 HOXB3P14651 431 aaPredicted RBP8.52□□□□□ -1.04
CHD3-202ENST00000358181 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.04
CHD3-202ENST00000358181 PCSK4Q6UW60 755 aa8.52□□□□□ -1.04
CHD3-202ENST00000358181 ZNF488Q96MN9 340 aa8.52□□□□□ -1.04
CHD3-202ENST00000358181 ERGP11308 486 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 DAOP14920 347 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 SLC25A35Q3KQZ1 300 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 SLC16A13Q7RTY0 426 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
CHD3-202ENST00000358181 MAST2Q6P0Q8 1798 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms