RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CHCHD2Q9Y6H1 151 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 DOCK7Q96N67 2140 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 WDFY4Q6ZS81 3184 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A0J9YW62 118 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IAPPP10997 89 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CTSSP25774 331 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CST9LP1Q5W188 147 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 Q6ZPA2 131 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 TGIF2LYQ8IUE0 185 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 LYRM2Q9NU23 88 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGKV1D-13A0A0B4J2D9 117 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 HS3ST1O14792 307 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 PITX3O75364 302 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IFNA5P01569 189 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGLV3-1P01715 115 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGKV1-13P0DP09 117 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 ERVS71-1P61550 626 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 SLC25A53Q5H9E4 307 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 RBMXL1Q96E39 390 aaKnown RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR5B12Q96R08 314 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CDX2Q99626 313 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 SRXN1Q9BYN0 137 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 C19orf25Q9UFG5 118 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CEBPZOSA8MTT3 80 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CDS2O95674 445 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 TOMM40O96008 361 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CD55P08174 381 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CDC34P49427 236 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 GPM6AP51674 278 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CNN1P51911 297 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 RBM11P57052 281 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CEACAM16Q2WEN9 425 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 LDLRAD2Q5SZI1 272 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 TEX43Q6ZNM6 134 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 AAED1Q7RTV5 226 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 LHFPL4Q7Z7J7 247 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 SELENOHQ8IZQ5 122 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 LRTM2Q8N967 370 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 SMRP1Q8NCR6 262 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 SCGB1C1Q8TD33 95 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 RDH5Q92781 318 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 GNPNAT1Q96EK6 184 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 HS3ST6Q96QI5 342 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PCGF1Q9BSM1 259 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF430Q9H8G1 570 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 HSPB7Q9UBY9 170 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 R4GN57 208 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A096LPE4 126 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGHV3-64DA0A0J9YX35 117 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A1W2PPZ6 126 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF320A2RRD8 509 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 SERPINE2P07093 398 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PFN1P07737 140 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 BCL3P20749 454 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 OTX1P32242 354 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 NTF4P34130 210 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PLA2G5P39877 138 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PSG4Q00888 419 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 ADIRFQ15847 76 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 OCIAD2Q56VL3 154 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 C10orf128Q5T292 105 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 FAM27BQ5VT28 67 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 WDR5BQ86VZ2 330 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR1K1Q8NGR3 316 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CLDND2Q8NHS1 167 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 KCNE4Q8WWG9 221 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PYGO2Q9BRQ0 406 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PLK3Q9H4B4 646 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 VSIRQ9H7M9 311 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 CALHM2Q9HA72 323 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 PTRH2Q9Y3E5 179 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 AHCTF1Q8WYP5 2266 aa7.05□□□□□ -1.28
CDC42SE1-201ENST00000357235 SYNGR3O43761 229 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 CXCL13O43927 109 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 HBE1P02100 147 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 CD33P20138 364 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 TESK1Q15569 626 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF787Q6DD87 383 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZIC4Q8N9L1 334 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR56B2PQ8NGI1 322 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR10G4Q8NGN3 311 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SGCZQ96LD1 299 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SDF2L1Q9HCN8 221 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM9BQ9NQ34 198 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM106BQ9NUM4 274 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL19Q9UHD0 177 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 COX11Q9Y6N1 276 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 ARHGAP21Q5T5U3 1957 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 MAP1LC3B2A6NCE7 125 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SMPD2O60906 423 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 VAMP5O95183 116 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 FUT6P51993 359 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 SRPXP78539 464 aa7.04□□□□□ -1.28
CDC42SE1-201ENST00000357235 CCL7P80098 99 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms