RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PPIAL4FP0DN26 164 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 SRD5A2P31213 254 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 HDHD3Q9BSH5 251 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 PPIAL4AQ9Y536 164 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 MRPS18BQ9Y676 258 aaKnown RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 ARF6P62330 175 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 TMEM95Q3KNT9 176 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 DEFB121Q5J5C9 76 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 GLDNQ6ZMI3 551 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 OR10AC1Q8NH08 325 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 CHRNA10Q9GZZ6 450 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 DAOP14920 347 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 MFAP2P55001 183 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 ASAH1Q13510 395 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 KLF9Q13886 244 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 GAPTQ8N292 157 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 ZNF418Q8TF45 676 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 PRSS27Q9BQR3 290 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 ZFP36L2P47974 494 aaKnown RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 TEPPQ6URK8 271 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 GPBAR1Q8TDU6 330 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 PLP1P60201 277 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 MYEOVQ96EZ4 313 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 SYNGR1O43759 233 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 KBTBD11O94819 623 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 SIRT7Q9NRC8 400 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 CISD1Q9NZ45 108 aaKnown RBP15.12■□□□□ 0.01
COL27A1-201ENST00000356083 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 SAA1P0DJI8 122 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CTLA4P16410 223 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 ANKRD33Q7Z3H0 272 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CLRN3Q8NCR9 226 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 A0A0A6YYD5 115 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 TRAV1-2A0A0B4J238 106 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 A0A1B0GV72 72 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CD74P04233 296 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 GAPDHP04406 335 aaKnown RBP15.11■□□□□ 0.01
COL27A1-201ENST00000356083 VSIG10L2P0DP72 767 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CXorf1O96002 111 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 RAC3P60763 192 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 UBE2DNLQ8IWF7 75 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 K7N7A8 449 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 LDLRAD4O15165 306 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 PRR35P0CG20 571 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 ZDHHC22Q8N966 263 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 ZNF714Q96N38 554 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 FAM106AQ4KMX7 169 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 IGHV3OR16-13A0A075B7E8 117 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 IGHV3-74A0A0B4J1X5 117 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 GFRA3O60609 400 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CDS2O95674 445 aa15.11■□□□□ 0.01
COL27A1-201ENST00000356083 C1orf162Q8NEQ5 155 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-201ENST00000356083 CDK2AP2O75956 126 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 ANAPC16Q96DE5 110 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 IGHV1OR15-9A0A0B4J2B8 117 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 IGHV1OR21-1A0A087WYE8 117 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 TMEM229AB2RXF0 380 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 TCF21O43680 179 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 SNRPD3P62318 126 aaKnown RBP15.1■□□□□ 0.01
COL27A1-201ENST00000356083 CXorf66Q5JRM2 361 aaPredicted RBP15.1■□□□□ 0.01
COL27A1-201ENST00000356083 NBASA2RRP1 2371 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 TMEM92Q6UXU6 159 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 GPR82Q96P67 336 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 DLK1P80370 383 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 UCN2Q96RP3 112 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 ADAP1O75689 374 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 C11orf44Q8N8P7 122 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 OR2V2Q96R30 315 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 SYT11Q9BT88 431 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 RNF122Q9H9V4 155 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 PRNDQ9UKY0 176 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 FUCA1P04066 466 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 PGA4P0DJD7 388 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 PGA5P0DJD9 388 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 ST3GAL2Q16842 350 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 NT5CQ8TCD5 201 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 STARD10Q9Y365 291 aa15.1■□□□□ 0.01
COL27A1-201ENST00000356083 LTBRP36941 435 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 FGF11Q92914 225 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
COL27A1-201ENST00000356083 SOCS1O15524 211 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 B4DEV8 164 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 ISG15P05161 165 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 GAGE10A6NGK3 116 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 PSG2P11465 335 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 SPNP16150 400 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 LPAR3Q9UBY5 353 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 ISL1P61371 349 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 HKR1P10072 659 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 PRICKLE4Q2TBC4 344 aa15.09■□□□□ 0.01
COL27A1-201ENST00000356083 HYPMO75409 117 aa15.08■□□□□ 0.01
COL27A1-201ENST00000356083 SFT2D2O95562 160 aa15.08■□□□□ 0.01
COL27A1-201ENST00000356083 TGFAP01135 160 aa15.08■□□□□ 0.01
COL27A1-201ENST00000356083 IL13RA2Q14627 380 aa15.08■□□□□ 0.01
COL27A1-201ENST00000356083 SPNS1Q9H2V7 528 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms