RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SPPL3Q8TCT6 385 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 CORO2AQ92828 525 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
CD46-203ENST00000354848 ZNF442Q9H7R0 627 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 CCL28Q9NRJ3 127 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 ALKBH4Q9NXW9 302 aa6.71□□□□□ -1.34
CD46-203ENST00000354848 KNL1Q8NG31 2342 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 TRAV30A0A087WSZ9 112 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 H0Y980 276 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 RBFOX2O43251 390 aaKnown RBP eCLIP6.7□□□□□ -1.342e-6■■■□□ 16.6
CD46-203ENST00000354848 CIDEAO60543 219 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 PDCD6O75340 191 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 TNFSF4P23510 183 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 TSPOP30536 169 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 RPL19P84098 196 aaKnown RBP6.7□□□□□ -1.34
CD46-203ENST00000354848 MALLQ13021 153 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 CNKSR3Q6P9H4 555 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 Q6ZSR3 168 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 ZNF114Q8NC26 417 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 SLC37A2Q8TED4 501 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 C10orf35Q96D05 121 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 SFRP2Q96HF1 295 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 DERL1Q9BUN8 251 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 TBL2Q9Y4P3 447 aaKnown RBP6.7□□□□□ -1.34
CD46-203ENST00000354848 LRP4O75096 1905 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 SERPINA7P05543 415 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 Q0VG73 95 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 RSPO1Q2MKA7 263 aaPredicted RBP6.7□□□□□ -1.34
CD46-203ENST00000354848 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 OR2M3Q8NG83 312 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 ST8SIA1Q92185 356 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 SPSB1Q96BD6 273 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 ZNF501Q96CX3 271 aaPredicted RBP6.7□□□□□ -1.34
CD46-203ENST00000354848 OR6C1Q96RD1 312 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 SLC35D1Q9NTN3 355 aa6.7□□□□□ -1.34
CD46-203ENST00000354848 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
CD46-203ENST00000354848 GDF9O60383 454 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 GNB1P62873 340 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 PSG4Q00888 419 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 PLPPR5Q32ZL2 321 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 ZNF776Q68DI1 518 aaPredicted RBP6.69□□□□□ -1.34
CD46-203ENST00000354848 ASCL4Q6XD76 172 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 OR10G9Q8NGN4 311 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 OR10G7Q8NGN6 311 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 OR5P3Q8WZ94 311 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 NUDT11Q96G61 164 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 LRFN3Q9BTN0 628 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 WNT10AQ9GZT5 417 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 TIMM9Q9Y5J7 89 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 MED12Q93074 2177 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 EXPH5Q8NEV8 1989 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 TMEM150CB9EJG8 249 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 TRAF3IP2O43734 574 aaPredicted RBP6.69□□□□□ -1.34
CD46-203ENST00000354848 ZNF253O75346 499 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 PGLYRP1O75594 196 aaPredicted RBP6.69□□□□□ -1.34
CD46-203ENST00000354848 NAPSAO96009 420 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 CRYAAP02489 173 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 SCTP09683 121 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 SLC25A6P12236 298 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 PRSS12P56730 875 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 SNAI3Q3KNW1 292 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 SPANXN5Q5MJ07 72 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 TMPRSS7Q7RTY8 843 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 KLHDC1Q8N7A1 406 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 OR1K1Q8NGR3 316 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 CACNG5Q9UF02 275 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 GON4LQ3T8J9 2241 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 CDH23Q9H251 3354 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 MDFIC2A0A1B0GVS7 189 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 VSTM2BA6NLU5 285 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 FAM166BA8MTA8 275 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 EFNA2O43921 213 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 WDR1O75083 606 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 NDUFB4O95168 129 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 DRD1P21728 446 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 F2RP25116 425 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 EFNA3P52797 238 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 SLC38A11Q08AI6 406 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 VAMP3Q15836 100 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 C12orf76Q8N812 135 aaPredicted RBP6.69□□□□□ -1.34
CD46-203ENST00000354848 OR2AE1Q8NHA4 323 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 BORCS8Q96FH0 119 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 RPH3ALQ9UNE2 315 aa6.69□□□□□ -1.34
CD46-203ENST00000354848 DIDO1Q9BTC0 2240 aaKnown RBP6.68□□□□□ -1.34
CD46-203ENST00000354848 CHD7Q9P2D1 2997 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 IGHV2-26A0A0B4J1V2 119 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 M0R135 149 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 OR7C1O76099 320 aaPredicted RBP6.68□□□□□ -1.34
CD46-203ENST00000354848 PSG2P11465 335 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 KITLGP21583 273 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 AMTP48728 403 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 PMP22Q01453 160 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 HIST3H3Q16695 136 aa6.68□□□□□ -1.34
CD46-203ENST00000354848 ZDHHC23Q8IYP9 409 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms