RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 GATSQ8NAP1 163 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 OR8S1Q8NH09 359 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 C1orf147Q96MC9 270 aaPredicted RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 YPEL2Q96QA6 119 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 SDK1Q7Z5N4 2213 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 RP1P56715 2156 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 IGHV1OR21-1A0A087WYE8 117 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 C13orf42A0A1B0GVH6 325 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 M0QYG6 137 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 OR1K1Q8NGR3 316 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 ELL3Q9HB65 397 aaPredicted RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 G3V4G9 280 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 KCTD18Q6PI47 426 aaPredicted RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 ASCL4Q6XD76 172 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 ZNF66Q6ZN08 573 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 MDGA2Q7Z553 956 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 NRGNQ92686 78 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 RARRES2Q99969 163 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 NMES1Q9C002 83 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 CST11Q9H112 138 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 LPAR5Q9H1C0 372 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 ZNF581Q9P0T4 197 aa9.32□□□□□ -0.92
SND1-201ENST00000354725 EP300Q09472 2414 aaPredicted RBP9.32□□□□□ -0.92
SND1-201ENST00000354725 FAM186AA6NE01 2351 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 PCNX2A6NKB5 2137 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 C17orf51A8MQB3 221 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 B4DGG1 531 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 G3V3Y1 287 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 CLDN34H7C241 214 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 PRKNO60260 465 aaPredicted RBP9.31□□□□□ -0.92
SND1-201ENST00000354725 TNFSF15O95150 251 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 OR10J4P0C629 311 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 IL15RAQ13261 267 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 PPP1R1AQ13522 171 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 NSDHLQ15738 373 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 PLEKHJ1Q9NW61 149 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 BET1LQ9NYM9 111 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 A0A1W2PRS3 328 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 MS4A18H0YCH9 400 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 AMY2AP04746 511 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 MS4A18Q3C1V0 323 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 DNM1P34Q6PK57 102 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 HOGA1Q86XE5 327 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 ZNF761Q86XN6 746 aaPredicted RBP9.31□□□□□ -0.92
SND1-201ENST00000354725 SAXO1Q8IYX7 474 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 OR2V2Q96R30 315 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 TAAR6Q96RI8 345 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 NAA38Q9BRA0 125 aaKnown RBP9.31□□□□□ -0.92
SND1-201ENST00000354725 SMIM3Q9BZL3 60 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 LOC400499M0QZD8 3231 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 ASXL3Q9C0F0 2248 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 CEP250Q9BV73 2442 aa9.31□□□□□ -0.92
SND1-201ENST00000354725 LOC101059948A0A1B0GTJ6 334 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 FOXI3A8MTJ6 420 aaPredicted RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 LMX1BO60663 402 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CYB5AP00167 134 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 RAB32Q13637 225 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 OR1N2Q8NGR9 330 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 HHLA2Q9UM44 414 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 TMED7Q9Y3B3 224 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 LOC107986453A0A1B0GWG9 222 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 B4DEV8 164 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 RBFOX2O43251 390 aaKnown RBP eCLIP9.3□□□□□ -0.925e-9■■■■■ 27.5
SND1-201ENST00000354725 CDS2O95674 445 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 FTH1P19P0C7X4 201 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 DANCRP0C864 163 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 OR1D5P58170 312 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CCL7P80098 99 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 WDR25Q64LD2 544 aaPredicted RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 SLC25A44Q96H78 314 aaPredicted RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 AKIRIN1Q9H9L7 192 aaPredicted RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
SND1-201ENST00000354725 ITPR1Q14643 2758 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 H3BML4 177 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 SLC16A7O60669 478 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 TCL1AP56279 114 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 ULBP2Q9BZM5 246 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 WDR54Q9H977 334 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CKLFQ9UBR5 152 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 NBEAQ8NFP9 2946 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 CABIN1Q9Y6J0 2220 aa9.3□□□□□ -0.92
SND1-201ENST00000354725 A0A1B0GUS0 222 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 ZNF785A8K8V0 405 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
SND1-201ENST00000354725 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms