RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 IGKV1-6A0A0C4DH72 117 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 ZNF705EA8MWA4 302 aaPredicted RBP9.31□□□□□ -0.92
SVIP-201ENST00000354193 CCL3L1P16619 93 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 KITLGP21583 273 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 KRTAP27-1Q3LI81 207 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 PRAMEF5Q5TYX0 476 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 TREM1Q9NP99 234 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 FLNCQ14315 2725 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 TRAV38-1A0A0B4J264 116 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
SVIP-201ENST00000354193 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
SVIP-201ENST00000354193 H2BFWTQ7Z2G1 175 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 OR10X1Q8NGY0 326 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 ARPC5LQ9BPX5 153 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 ZNF665Q9H7R5 613 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 IGHV3-72A0A0B4J1Y9 119 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 A0A0D9SG52 128 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 RPS2P15880 293 aaKnown RBP9.31□□□□□ -0.92
SVIP-201ENST00000354193 S100A1P23297 94 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 OR2B8PP59922 312 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 ERVK-16P61578 105 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
SVIP-201ENST00000354193 MGST3O14880 152 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 DEFA5Q01523 94 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 GUSBP1Q15486 140 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 SURF2Q15527 256 aaPredicted RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 LRRC10Q5BKY1 277 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 Q6P435 159 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 MOB1BQ7L9L4 216 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 ST8SIA2Q92186 375 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 ZNRD1Q9P1U0 126 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 E7EQL1 145 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 NAPSAO96009 420 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 F2RP25116 425 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 TMEM267Q0VDI3 215 aaPredicted RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 RPL39P5Q59GN2 51 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 ASCL4Q6XD76 172 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 EIF3GO75821 320 aaKnown RBP eCLIP9.3□□□□□ -0.92
SVIP-201ENST00000354193 APELAP0DMC3 54 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 TPT1P13693 172 aaKnown RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 LHFPL1Q86WI0 220 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 DRAM1Q8N682 238 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
SVIP-201ENST00000354193 IGKV1D-17A0A075B6S4 117 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 BORCS7-ASMTA0A0B4J1R7 106 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 OR2A4O95047 310 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 CRYZL1O95825 349 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 THBDP07204 575 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 NHLH2Q02577 135 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 CDSNQ15517 529 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 COQ2Q96H96 371 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 OR2A7Q96R45 310 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 ONECUT1Q9UBC0 465 aa9.3□□□□□ -0.92
SVIP-201ENST00000354193 LGALS8O00214 317 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 METTL15P1P0C7V9 234 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 NAT1P18440 290 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 MECP2P51608 486 aaKnown RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 MBNL2Q5VZF2 373 aaKnown RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 ABHD5Q8WTS1 349 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 EDARADDQ8WWZ3 215 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 LIN7CQ9NUP9 197 aaKnown RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 ZDHHC8Q9ULC8 765 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 PRELID3BQ9Y3B1 194 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 LRBAP50851 2863 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 TRAV14DV4A0A0A6YYC5 116 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 NUPL2O15504 423 aaKnown RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 IFNA10P01566 189 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 APOC3P02656 99 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 DNM1P46Q6ZS02 220 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 LHFPL5Q8TAF8 219 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 TMEM231Q9H6L2 316 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 HEYLQ9NQ87 328 aaPredicted RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 OR6C3Q9NZP0 311 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 NAV3Q8IVL0 2385 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 SRRM5B3KS81 715 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 CHST1O43916 411 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 MED6O75586 246 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 CD37P11049 281 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms