RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ZFP82Q8N141 532 aa18.62■□□□□ 0.57
UPF3A-201ENST00000351487 C9orf106Q8NAJ2 232 aa18.62■□□□□ 0.57
UPF3A-201ENST00000351487 CXXC4Q9H2H0 198 aa18.62■□□□□ 0.57
UPF3A-201ENST00000351487 PSENENQ9NZ42 101 aa18.62■□□□□ 0.57
UPF3A-201ENST00000351487 TRAV17A0A0B4J275 112 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 WISP2O76076 250 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 HSPB1P04792 205 aaKnown RBP18.61■□□□□ 0.57
UPF3A-201ENST00000351487 SRP19P09132 144 aaKnown RBP18.61■□□□□ 0.57
UPF3A-201ENST00000351487 RAB2AP61019 212 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 THNSL2Q86YJ6 484 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 PRR7Q8TB68 274 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 GALMQ96C23 342 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 OOEPA6NGQ2 149 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 PRR33A8MZF0 331 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 C12orf77C9JDV5 145 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 KITLGP21583 273 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 ICAM4Q14773 271 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 ZNF525Q8N782 197 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 OR1L1Q8NH94 360 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 SFT2D1Q8WV19 159 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 SARAFQ96BY9 339 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 PSMG3Q9BT73 122 aaPredicted RBP18.61■□□□□ 0.57
UPF3A-201ENST00000351487 MMP24Q9Y5R2 645 aa18.61■□□□□ 0.57
UPF3A-201ENST00000351487 C1orf196B1AJZ1 125 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 SCAF4O95104 1147 aaKnown RBP18.6■□□□□ 0.57
UPF3A-201ENST00000351487 IFNA4P05014 189 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 IAPPP10997 89 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 DAOP14920 347 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 OR3A1P47881 315 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 SLC25A24Q6NUK1 477 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 ACP7Q6ZNF0 438 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 ZNF826PQ6ZT77 177 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 CLDND2Q8NHS1 167 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 ISOC2Q96AB3 205 aa18.6■□□□□ 0.57
UPF3A-201ENST00000351487 A0A1W2PPH5 198 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 WNT9BO14905 357 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 AGFG2O95081 481 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 OR8U8P0C7N1 319 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 HBG1P69891 147 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 HBG2P69892 147 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 ARL16Q0P5N6 197 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 EIF4EBP1Q13541 118 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-201ENST00000351487 HAGHQ16775 308 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 HAPLN4Q86UW8 402 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 FGFRL1Q8N441 504 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 PARD6GQ9BYG4 376 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-201ENST00000351487 PPIHO43447 177 aaKnown RBP18.59■□□□□ 0.57
UPF3A-201ENST00000351487 METTL15P1P0C7V9 234 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 FTH1P19P0C7X4 201 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 AGAP20933 346 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 RPL35P42766 123 aaKnown RBP18.59■□□□□ 0.57
UPF3A-201ENST00000351487 AKR1D1P51857 326 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 MSMO1Q15800 293 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 WDR82Q6UXN9 313 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 CXorf67Q86X51 503 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-201ENST00000351487 RNF150Q9ULK6 438 aa18.59■□□□□ 0.57
UPF3A-201ENST00000351487 A6NLC8 198 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 IGLV1-44P01699 117 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 CECR9P0C854 216 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 MAS1LP35410 378 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 SCGB1C1Q8TD33 95 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 COQ2Q96H96 371 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 BCL2L14Q9BZR8 327 aa18.58■□□□□ 0.57
UPF3A-201ENST00000351487 PUS1Q9Y606 427 aaKnown RBP eCLIP18.58■□□□□ 0.57
UPF3A-201ENST00000351487 P0C879 139 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 WT1P19544 449 aaPredicted RBP18.58■□□□□ 0.56
UPF3A-201ENST00000351487 IL2RGP31785 369 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 KHDC3LQ587J8 217 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 Q6ZR03 302 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF561Q8N587 486 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 C5orf30Q96GV9 206 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 RSG1Q9BU20 258 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 OR2D2Q9H210 308 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 PLSCR4Q9NRQ2 329 aa18.58■□□□□ 0.56
UPF3A-201ENST00000351487 TIMM8AO60220 97 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-201ENST00000351487 HBZP02008 142 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 RAB5AP20339 215 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 AESQ08117 197 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 LRRC75BQ2VPJ9 315 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 ACSF3Q4G176 576 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-201ENST00000351487 DEFB124Q8NES8 71 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 MALSU1Q96EH3 234 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 A0A1B0GWJ7 208 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 A0A1W2PPE2 198 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF98A6NK75 572 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 ZNF891A8MT65 544 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-201ENST00000351487 IFNL4K9M1U5 179 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 KRBOX4Q5JUW0 171 aa18.57■□□□□ 0.56
UPF3A-201ENST00000351487 H3BQ15 152 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 ARG1P05089 322 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 UBE2KP61086 200 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 RPS23P62266 143 aaKnown RBP18.56■□□□□ 0.56
UPF3A-201ENST00000351487 FOXF2Q12947 444 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 PRAMEF6Q5VXH4 476 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 MBNL2Q5VZF2 373 aaKnown RBP18.56■□□□□ 0.56
UPF3A-201ENST00000351487 OR10G4Q8NGN3 311 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 YPEL4Q96NS1 127 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 RPRMQ9NS64 109 aa18.56■□□□□ 0.56
UPF3A-201ENST00000351487 SERF2P84101 59 aa18.55■□□□□ 0.56
UPF3A-201ENST00000351487 TNFRSF9Q07011 255 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms