RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
UBA3-201ENST00000349511 ZG16O60844 167 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 C1QL1O75973 258 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 TFF1P04155 84 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 GLAP06280 429 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 RAB5BP61020 215 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 HERV-K104P61576 105 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 AWAT1Q58HT5 328 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 C1orf174Q8IYL3 243 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 SLC35G3Q8N808 338 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 Q8NFD4 153 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
UBA3-201ENST00000349511 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 PKIBQ9C010 78 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 EIF5A2Q9GZV4 153 aaKnown RBP11.28□□□□□ -0.6
UBA3-201ENST00000349511 TREM2Q9NZC2 230 aa11.28□□□□□ -0.6
UBA3-201ENST00000349511 PRH1P02810 166 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 IFNA4P05014 189 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.6
UBA3-201ENST00000349511 CEBPDP49716 269 aaPredicted RBP11.27□□□□□ -0.6
UBA3-201ENST00000349511 MEX3BQ6ZN04 569 aaKnown RBP11.27□□□□□ -0.6
UBA3-201ENST00000349511 C5orf24Q7Z6I8 188 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 RDH5Q92781 318 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 OR14J1Q9UGF5 321 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.6
UBA3-201ENST00000349511 DCHS2Q6V1P9 2916 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
UBA3-201ENST00000349511 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 NXPH2O95156 264 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 PLAUP00749 431 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 PPYP01298 95 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 OR4A8P0C604 315 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 ZNF44P15621 663 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 FUT3P21217 361 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 MEOX2P50222 304 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 IGSF11Q5DX21 431 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 NEK7Q8TDX7 302 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 OR2V2Q96R30 315 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
UBA3-201ENST00000349511 SPTAN1Q13813 2472 aaKnown RBP11.27□□□□□ -0.61
UBA3-201ENST00000349511 FLNCQ14315 2725 aa11.27□□□□□ -0.61
UBA3-201ENST00000349511 C3orf85A0A1B0GTC6 90 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 MPPED1O15442 326 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 PGA5P0DJD9 388 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 LMO1P25800 156 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 RAB5CP51148 216 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 SELENOVP59797 346 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 RPS23P62266 143 aaKnown RBP11.26□□□□□ -0.61
UBA3-201ENST00000349511 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
UBA3-201ENST00000349511 CTAG1AP78358 180 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBA3-201ENST00000349511 ADIPOQQ15848 244 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
UBA3-201ENST00000349511 C20orf24Q9BUV8 137 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 POLDIP2Q9Y2S7 368 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 HRNRQ86YZ3 2850 aaPredicted RBP11.26□□□□□ -0.61
UBA3-201ENST00000349511 FAM24AA6NFZ4 105 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 TMEM210A6NLX4 147 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 C1orf196B1AJZ1 125 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 TRDCB7Z8K6 153 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 M0R036 132 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 SIRPB1O00241 398 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 GNMTQ14749 295 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 TMEM182Q6ZP80 229 aaPredicted RBP11.26□□□□□ -0.61
UBA3-201ENST00000349511 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 PLK3Q9H4B4 646 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 C11orf1Q9H5F2 150 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 NGBQ9NPG2 151 aa11.26□□□□□ -0.61
UBA3-201ENST00000349511 KIAA2026Q5HYC2 2103 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 SHISA9B4DS77 424 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
UBA3-201ENST00000349511 DAOP14920 347 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 PMELP40967 661 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 RNF212Q495C1 297 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 NCMAPQ5T1S8 102 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 DMRTC2Q8IXT2 367 aaPredicted RBP11.25□□□□□ -0.61
UBA3-201ENST00000349511 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 FBXO7Q9Y3I1 522 aa11.25□□□□□ -0.61
UBA3-201ENST00000349511 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 A0A1B0GV50 99 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 DEGS1O15121 323 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 SIAH2O43255 324 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 MT-ND4LP03901 98 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 GNRHRP30968 328 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
UBA3-201ENST00000349511 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 MOGAT3Q86VF5 341 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 TGIF2LYQ8IUE0 185 aa11.24□□□□□ -0.61
UBA3-201ENST00000349511 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms