RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 DCAF12L2Q5VW00 463 aa13.34□□□□□ -0.27
PTPRO-202ENST00000348962 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
PTPRO-202ENST00000348962 TMEM91Q6ZNR0 172 aa13.34□□□□□ -0.27
PTPRO-202ENST00000348962 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
PTPRO-202ENST00000348962 CALYQ9NYX4 217 aa13.34□□□□□ -0.27
PTPRO-202ENST00000348962 NCOR1O75376 2440 aa13.33□□□□□ -0.27
PTPRO-202ENST00000348962 AKAP6Q13023 2319 aa13.33□□□□□ -0.27
PTPRO-202ENST00000348962 COL4A1P02462 1669 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 HAX1O00165 279 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 FCN1O00602 326 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 OR4C12Q96R67 309 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 ZNF703Q9H7S9 590 aaPredicted RBP13.33□□□□□ -0.28
PTPRO-202ENST00000348962 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 FABP4P15090 132 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 IRF3Q14653 427 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 OR9G1Q8NH87 305 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 CACNA1IQ9P0X4 2223 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 RECKO95980 971 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 CYB5R3P00387 301 aaPredicted RBP13.33□□□□□ -0.28
PTPRO-202ENST00000348962 PMCHP20382 165 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.28
PTPRO-202ENST00000348962 RPL8P62917 257 aaKnown RBP13.33□□□□□ -0.28
PTPRO-202ENST00000348962 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.28
PTPRO-202ENST00000348962 C4orf51C9J302 202 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 C11orf94C9JXX5 98 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 TNFSF10P50591 281 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM50BP56557 158 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 FAM106AQ4KMX7 169 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 C16orf82Q7Z2V1 217 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM37Q8WXS4 190 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 LINC00470Q9BZP3 86 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 PRR13Q9NZ81 148 aa13.33□□□□□ -0.28
PTPRO-202ENST00000348962 IGHV3-21A0A0B4J1V1 117 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 APCDD1LQ8NCL9 501 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SNRNP40Q96DI7 357 aaKnown RBP13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SIGLEC12Q96PQ1 595 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SIRT7Q9NRC8 400 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SCN10AQ9Y5Y9 1956 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 FAM157CP0CG43 387 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 COX19Q49B96 90 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 KHDC3LQ587J8 217 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM88Q6PEY1 159 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 DNM1P46Q6ZS02 220 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 FAM57AQ8TBR7 257 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 ABHD14BQ96IU4 210 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 NIT2Q9NQR4 276 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 RCC2Q9P258 522 aaKnown RBP13.32□□□□□ -0.28
PTPRO-202ENST00000348962 RALYQ9UKM9 306 aaKnown RBP13.32□□□□□ -0.28
PTPRO-202ENST00000348962 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SELENOTP62341 195 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SLC35E3Q7Z769 313 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 SEC11CQ9BY50 192 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 RIGQ13278 110 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 METTL26Q96S19 204 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 NPVFQ9HCQ7 196 aa13.32□□□□□ -0.28
PTPRO-202ENST00000348962 TEX50A0A1B0GTY4 177 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 NPIPB13A6NJU9 1138 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 KIAA1324LA8MWY0 1029 aaPredicted RBP13.31□□□□□ -0.28
PTPRO-202ENST00000348962 NPIPB4C9JG80 1138 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 ISG15P05161 165 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 OR5AL1P0C617 328 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 PNRC1Q12796 327 aaPredicted RBP13.31□□□□□ -0.28
PTPRO-202ENST00000348962 ABHD12Q8N2K0 398 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 PTGDSP41222 190 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 NHLH1Q02575 133 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 NHLH2Q02577 135 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 MED19A0JLT2 244 aaPredicted RBP13.31□□□□□ -0.28
PTPRO-202ENST00000348962 EFNB2P52799 333 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTPRO-202ENST00000348962 BSXQ3C1V8 233 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 SAXO1Q8IYX7 474 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 KCNE5Q9UJ90 142 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 CD40P25942 277 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 KIR2DL2P43627 348 aaPredicted RBP13.31□□□□□ -0.28
PTPRO-202ENST00000348962 HIST1H3AP68431 136 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 SLC25A53Q5H9E4 307 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 CLEC7AQ9BXN2 247 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 WNT5BQ9H1J7 359 aa13.31□□□□□ -0.28
PTPRO-202ENST00000348962 TFPI2P48307 235 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 NEU4Q8WWR8 484 aaPredicted RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 DLL3Q9NYJ7 618 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 TDRD15B5MCY1 1934 aaKnown RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 ZNF729A6NN14 1252 aaPredicted RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 SS18L1O75177 396 aaPredicted RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 OR10G8Q8NGN5 311 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM45BQ96B21 275 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 DCTN5Q9BTE1 182 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 RAXQ9Y2V3 346 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 MFSD2BA6NFX1 497 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 CEACAM18A8MTB9 384 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 WNT9BO14905 357 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 CXorf1O96002 111 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms