RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 A1L4Q6 167 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 SPINT1O43278 529 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 IGHV3-43DP0DP04 118 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 TDGF1P13385 188 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 SP6Q3SY56 376 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 TAAR6Q96RI8 345 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 PLAC1Q9HBJ0 212 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM38BQ9NVV0 291 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 ZNF831Q5JPB2 1677 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 HRKO00198 91 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 OR2A4O95047 310 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 BCL3P20749 454 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 C1orf53Q5VUE5 145 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 PRR7Q8TB68 274 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 OR2A7Q96R45 310 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 CD74P04233 296 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 HOXC4P09017 264 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 SFTPA2Q8IWL1 248 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 TRBV9A0A0B4J1U6 114 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 APOMO95445 188 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 C8orf82Q6P1X6 216 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 CALHM1Q8IU99 346 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 P2RX4Q99571 388 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 SPINK8P0C7L1 97 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 MAGEA5P43359 124 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 H1FOOQ8IZA3 346 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 PELI1Q96FA3 418 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 GUCD1Q96NT3 240 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 COLQQ9Y215 455 aaPredicted RBP9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 OR2M5A3KFT3 312 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 EPPINO95925 133 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 HLA-DRB1P01911 266 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 FBLIM1Q8WUP2 373 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 CLDN23Q96B33 292 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM30CPA0ZSE6 113 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 TNFRSF1AP19438 455 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 COX7A1P24310 79 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 CEACAM6P40199 344 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM177Q53S58 311 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 ARHGAP5-AS1Q96IT6 56 aa9.7□□□□□ -0.86
SMARCE1-202ENST00000348513 C7orf71A4D174 169 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 OR3A4PP47883 348 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 KISS1Q15726 138 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SPINK9Q5DT21 86 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 KCNS1Q96KK3 526 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 RBKSQ9H477 322 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 PLPP3O14495 311 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 PITX3O75364 302 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 ACTL6AO96019 429 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 AMBPP02760 352 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 CT45A10P0DMU9 189 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 GNG3P63215 75 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SRSF4Q08170 494 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 THSD4Q6ZMP0 1018 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 TGIF2LYQ8IUE0 185 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 OR10G9Q8NGN4 311 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 OR10G7Q8NGN6 311 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SGMS2Q8NHU3 365 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 TMEM170AQ8WVE7 144 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 TRIP11Q15643 1979 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 CA11O75493 328 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 AGFG2O95081 481 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 ZNF205O95201 554 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 MELTFP08582 738 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 ZBTB25P24278 435 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 WNT5AP41221 380 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 FUT7Q11130 342 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 PNKDQ8N490 385 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 GBGT1Q8N5D6 347 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 TAAR3PQ9P1P4 343 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 STRCP1A6NGW2 1772 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SIPA1L3O60292 1781 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 A0A1W2PPE3 182 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SLC17A2O00624 439 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 NGFP01138 241 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 AMY1AP04745 511 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 IL4P05112 153 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 MGAT2Q10469 447 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 GFI1BQ5VTD9 330 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 C1QL3Q5VWW1 255 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 MRGPREQ86SM8 312 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 DMRTC2Q8IXT2 367 aaPredicted RBP9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 ASB10Q8WXI3 467 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 SPXQ9BT56 116 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 IGHV5-10-1A0A0J9YXX1 117 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 GRIFINA4D1Z8 144 aa9.69□□□□□ -0.86
SMARCE1-202ENST00000348513 COX7A2P2O60397 106 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms