RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CT45A6P0DMU7 189 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CT45A5P0DMU8 189 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CT45A7P0DMV0 189 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
NUP50-201ENST00000347635 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 C17orf82Q86X59 251 aaPredicted RBP12.69□□□□□ -0.38
NUP50-201ENST00000347635 ZBTB34Q8NCN2 500 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 GPR146Q96CH1 333 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 P2RX4Q99571 388 aa12.69□□□□□ -0.38
NUP50-201ENST00000347635 IGSF23A1L1A6 192 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 GLIPR1P48060 266 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 PLAURQ03405 335 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 TMEM183BQ1AE95 376 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 OR8G5Q8NG78 346 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 IL22RA2Q969J5 263 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
NUP50-201ENST00000347635 FCN1O00602 326 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 CD3EP07766 207 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
NUP50-201ENST00000347635 RHOBP62745 196 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 TRBV6-7A0A0A0MS04 114 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 SOX15O60248 233 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 MMP7P09237 267 aaPredicted RBP12.68□□□□□ -0.38
NUP50-201ENST00000347635 CCL1P22362 96 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 B2MP61769 119 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 TUBA4BQ9H853 241 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 FOXJ2Q9P0K8 574 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 OR10J4P0C629 311 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 GABRA4P48169 554 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 P2RY6Q15077 328 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
NUP50-201ENST00000347635 NAT2P11245 290 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 BPIFB3P59826 476 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 ERHP84090 104 aaKnown RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 SLC25A53Q5H9E4 307 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 ZNF506Q5JVG8 444 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 TIAF1O95411 115 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 GNG4P50150 75 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 RSPO4Q2I0M5 234 aaPredicted RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 FAM89BQ8N5H3 189 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 OR10S1Q8NGN2 331 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 CXXC4Q9H2H0 198 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 IGKV1-9A0A0C4DH69 117 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 RPL29P47914 159 aaKnown RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 DEFB108BQ8NET1 73 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 OR2Z1Q8NG97 314 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 OR5B3Q8NH48 314 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 NOL4LQ96MY1 436 aaPredicted RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 WNT5BQ9H1J7 359 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 CLN8Q9UBY8 286 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 M0R143 59 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 HRASP01112 189 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 PMCHP20382 165 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 CFPP27918 469 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 HABP2Q14520 560 aaPredicted RBP12.67□□□□□ -0.38
NUP50-201ENST00000347635 SAXO1Q8IYX7 474 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 ZNF441Q8N8Z8 693 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 KLHDC3Q9BQ90 382 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 HEATR5BQ9P2D3 2071 aa12.67□□□□□ -0.38
NUP50-201ENST00000347635 KIAA1324LA8MWY0 1029 aaPredicted RBP12.66□□□□□ -0.38
NUP50-201ENST00000347635 NTN3O00634 580 aaPredicted RBP12.66□□□□□ -0.38
NUP50-201ENST00000347635 NPBWR2P48146 333 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
NUP50-201ENST00000347635 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 SLC45A2Q9UMX9 530 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
NUP50-201ENST00000347635 C3AR1Q16581 482 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 LRRC10Q5BKY1 277 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 KLHDC1Q8N7A1 406 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 LRFN3Q9BTN0 628 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
NUP50-201ENST00000347635 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 SEC16AO15027 2179 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 OR5G3P0C626 314 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 LRRC29Q8WV35 223 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 PRDM14Q9GZV8 571 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
NUP50-201ENST00000347635 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 SYNGR1O43759 233 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 IL17BQ9UHF5 180 aa12.65□□□□□ -0.38
NUP50-201ENST00000347635 CHCHD2Q9Y6H1 151 aaPredicted RBP12.65□□□□□ -0.38
NUP50-201ENST00000347635 MAP1BP46821 2468 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms