RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SOX8P57073 446 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 MSMO1Q15800 293 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 HIST3H3Q16695 136 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 ZNF468Q5VIY5 522 aaPredicted RBP13.09□□□□□ -0.31
LMNA-201ENST00000347559 ZNF611Q8N823 705 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 SDK2Q58EX2 2172 aa13.09□□□□□ -0.31
LMNA-201ENST00000347559 F2Z2F3 143 aa13.08□□□□□ -0.31
LMNA-201ENST00000347559 ZNHIT1O43257 154 aa13.08□□□□□ -0.31
LMNA-201ENST00000347559 CRISP2P16562 243 aa13.08□□□□□ -0.31
LMNA-201ENST00000347559 TNFRSF4P43489 277 aa13.08□□□□□ -0.31
LMNA-201ENST00000347559 C10orf35Q96D05 121 aa13.08□□□□□ -0.31
LMNA-201ENST00000347559 KIAA1324LA8MWY0 1029 aaPredicted RBP13.08□□□□□ -0.32
LMNA-201ENST00000347559 CLDN1O95832 211 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 NAPSAO96009 420 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 S100GP29377 79 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 UBE2NP61088 152 aaKnown RBP13.08□□□□□ -0.32
LMNA-201ENST00000347559 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.32
LMNA-201ENST00000347559 OR10G3Q8NGC4 313 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 TECTBQ96PL2 329 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 PCED1AQ9H1Q7 454 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 IL36RNQ9UBH0 155 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 DHHO43323 396 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 NDUFB4O95168 129 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 DRD1P21728 446 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 CD38P28907 300 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 FFAR4Q5NUL3 377 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 Q6ZN92 141 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 OR1L3Q8NH93 324 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 OBP2AQ9NY56 170 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
LMNA-201ENST00000347559 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 NDUFB8O95169 186 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 THBS3P49746 956 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
LMNA-201ENST00000347559 CARD18P57730 90 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 TMPRSS7Q7RTY8 843 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 ZNF114Q8NC26 417 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 HS3ST6Q96QI5 342 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 ULBP2Q9BZM5 246 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 ERRFI1Q9UJM3 462 aaPredicted RBP13.07□□□□□ -0.32
LMNA-201ENST00000347559 PPP1R3CQ9UQK1 317 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 RBM7Q9Y580 266 aaKnown RBP13.07□□□□□ -0.32
LMNA-201ENST00000347559 KIAA0100Q14667 2235 aaKnown RBP13.07□□□□□ -0.32
LMNA-201ENST00000347559 CTXND1A0A1B0GTU2 59 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 TDGF1P13385 188 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 SPATA45Q537H7 98 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
LMNA-201ENST00000347559 TMEM204Q9BSN7 226 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
LMNA-201ENST00000347559 OTX1P32242 354 aaPredicted RBP13.06□□□□□ -0.32
LMNA-201ENST00000347559 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 UBALD1Q8TB05 177 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 LMX1AQ8TE12 382 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 UCN2Q96RP3 112 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 RNF114Q9Y508 228 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 LTBP2Q14767 1821 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 AQP7P3A6NL99 342 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 NPIPA2E9PIF3 369 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 NPIPA3F8WFD2 350 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 CCL5P13501 91 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 LINC00310P59036 64 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
LMNA-201ENST00000347559 GAL3ST2Q9H3Q3 398 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 GPR27Q9NS67 375 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 ELOVL5Q9NYP7 299 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 DIRC3C9JPN6 131 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 KITLGP21583 273 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 ATP5G3P48201 142 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 HINT1P49773 126 aaPredicted RBP13.06□□□□□ -0.32
LMNA-201ENST00000347559 HNRNPA3P51991 378 aaKnown RBP13.06□□□□□ -0.32
LMNA-201ENST00000347559 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 PSMF1Q92530 271 aa13.06□□□□□ -0.32
LMNA-201ENST00000347559 ZNF552Q9H707 407 aaPredicted RBP13.06□□□□□ -0.32
LMNA-201ENST00000347559 CABIN1Q9Y6J0 2220 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 C3orf80F5H4A9 247 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 VENTXO95231 258 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 BCL3P20749 454 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 FUT6P51993 359 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 SELENOTP62341 195 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 PRDX4Q13162 271 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 HLA-BQ31612 363 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 SIGLECL1Q8N7X8 197 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 OR6C1Q96RD1 312 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 HS3ST3A1Q9Y663 406 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 TRAV39A0A0B4J263 110 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 LOC102725191A0A1B0GVB3 256 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 SH2D1BO14796 132 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 WNT2P09544 360 aa13.05□□□□□ -0.32
LMNA-201ENST00000347559 ZNF90Q03938 601 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms