RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 IGKV1D-17A0A075B6S4 117 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 A0A0G2JRQ6 117 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 E5RGE8 158 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 ERVFRD-1P60508 538 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 TLE1Q04724 770 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 SRSF4Q08170 494 aaKnown RBP14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 SWI5Q1ZZU3 235 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 FAM185AQ8N0U4 392 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 SPIN2AQ99865 258 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 SPIN2BQ9BPZ2 258 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 SNAPC5O75971 98 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 IGHV1-46P01743 117 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 DEFA5Q01523 94 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 CCDC28AQ8IWP9 274 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 LINC00052Q96N35 136 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 PLEKHF2Q9H8W4 249 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 GNG10P50151 68 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 PPP1R35Q8TAP8 253 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 KALRNO60229 2985 aa14.38□□□□□ -0.11
SMARCC2-202ENST00000347471 OOEPA6NGQ2 149 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 HOXD4P09016 255 aaPredicted RBP14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 P2RX3P56373 397 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 SRPXP78539 464 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 LILRB1Q8NHL6 650 aaPredicted RBP14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 H1FXQ92522 213 aaKnown RBP14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 RFNGQ9Y644 331 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 YLPM1P49750 1951 aaKnown RBP14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 CHST1O43916 411 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 PKD1L2Q7Z442 2459 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 COL12A1Q99715 3063 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 C1QL1O75973 258 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 VDAC1P21796 283 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 PTAFRP25105 342 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 LPAR6P43657 344 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 RNF7Q9UBF6 113 aa14.37□□□□□ -0.11
SMARCC2-202ENST00000347471 RAMP3O60896 148 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 G6PCP35575 357 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 NKX6-1P78426 367 aaPredicted RBP14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 TMEM267Q0VDI3 215 aaPredicted RBP14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 SPAG16Q8N0X2 631 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 TREM1Q9NP99 234 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 ODAMA1E959 279 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 GPR146Q96CH1 333 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 MS4A7Q9GZW8 240 aaPredicted RBP14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 GCM1Q9NP62 436 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 SRRM5B3KS81 715 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 SAP30LQ9HAJ7 183 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 HIVEP3Q5T1R4 2406 aa14.36□□□□□ -0.11
SMARCC2-202ENST00000347471 AQP10Q96PS8 301 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 PIGMQ9H3S5 423 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 CDS2O95674 445 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 POM121Q96HA1 1249 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 SLC25A32Q9H2D1 315 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 CYTL1Q9NRR1 136 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 CLDN1O95832 211 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 PLAUP00749 431 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 THBDP07204 575 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 KCNJ3P48549 501 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 SHEQ5VZ18 495 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 FAM90A1Q86YD7 464 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 OR2C3Q8N628 320 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 CA5BP1Q8WTZ4 195 aa14.35□□□□□ -0.11
SMARCC2-202ENST00000347471 LYNX1G3V0Z9 82 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 CLDN14O95500 239 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 LYNX1P0DP58 116 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 GPR12P47775 334 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 PRB3Q04118 309 aaPredicted RBP14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 H0Y980 276 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 UCP1P25874 307 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 FHITP49789 147 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 ADIPOQQ15848 244 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 WNK2Q9Y3S1 2297 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 BORCS7-ASMTA0A0B4J1R7 106 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 VSTM5A8MXK1 200 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 M0R1X1 148 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 RPL30P62888 115 aaKnown RBP14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 IL15RAQ13261 267 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 SPANXN5Q5MJ07 72 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 Q6ZRM9 215 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 RNF141Q8WVD5 230 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 TUBD1Q9UJT1 453 aa14.34□□□□□ -0.11
SMARCC2-202ENST00000347471 SLC35E4Q6ICL7 350 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 Q6ZS49 121 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 OR5C1Q8NGR4 320 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 SH3BGRL3Q9H299 93 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 HES4Q9HCC6 221 aa14.33□□□□□ -0.11
SMARCC2-202ENST00000347471 UCNP55089 124 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 NGBQ9NPG2 151 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 FAM96BQ9Y3D0 163 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 TXNL1O43396 289 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 FCGR3BO75015 233 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 TUBG1P23258 451 aa14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 EWSR1Q01844 656 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCC2-202ENST00000347471 HMGN3Q15651 99 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms