RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PPP1CCP36873 323 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZNF645Q8N7E2 425 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SNX22Q96L94 193 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TOLLIPQ9H0E2 274 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 MAGT1Q9H0U3 335 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR2D2Q9H210 308 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ESRP2Q9H6T0 727 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PLEKHF2Q9H8W4 249 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ATRXP46100 2492 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DSCAMO60469 2012 aa11.79□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TRGV8A0A0C4DH27 118 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 MGST3O14880 152 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGKV1-39P01597 117 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGKV1D-39P04432 117 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ID3Q02535 119 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 C11orf1Q9H5F2 150 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RNF7Q9UBF6 113 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 DIDO1Q9BTC0 2240 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGHV3-43A0A0B4J1X8 118 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ODAMA1E959 279 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 C15orf65H3BRN8 121 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 LGALS8O00214 317 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ATXN7O15265 892 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SPINT2O43291 252 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SSSCA1O60232 199 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IGHV3-43DP0DP04 118 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 PVALBP20472 110 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 EPHA1P21709 976 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TNFSF4P23510 183 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NHLH2Q02577 135 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 SSX8Q7RTT4 187 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TAS2R3Q9NYW6 316 aa11.78□□□□□ -0.52
CDK5RAP1-202ENST00000346416 K7N7A8 449 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NXPH3O95157 252 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR4A8P0C604 315 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CD80P33681 288 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 CAV2P51636 162 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 TUSC1Q2TAM9 212 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR2C3Q8N628 320 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 OR1S2Q8NGQ3 325 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 WFIKKN1Q96NZ8 548 aa11.77□□□□□ -0.52
CDK5RAP1-202ENST00000346416 NCOR2Q9Y618 2525 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 NBASA2RRP1 2371 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 A0A1B0GU03 582 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RNF212BA8MTL3 300 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PITX3O75364 302 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 FBXO24O75426 580 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 GZMHP20718 246 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ADAM5Q6NVV9 412 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 Q6ZRM9 215 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZBTB34Q8NCN2 500 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 FAM222BQ8WU58 562 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 C5orf30Q96GV9 206 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
CDK5RAP1-202ENST00000346416 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RELNP78509 3460 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DEFB108AA8MXU0 73 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 IGKV1-5P01602 117 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SLC25A6P12236 298 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 AKR1C2P52895 323 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 EDDM3BP56851 147 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CCL8P80075 99 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 HTD2P86397 168 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 EWSR1Q01844 656 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LPAR3Q9UBY5 353 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 DYSFO75923 2080 aa11.76□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 WRBO00258 174 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CHST1O43916 411 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TMEM50AO95807 157 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ADH4P08319 380 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 SELLP14151 372 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 VAMP2P63027 116 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 KLRB1Q12918 225 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 LTC4SQ16873 150 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 TGIF2LYQ8IUE0 185 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 Q8TCH9 128 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 RNF115Q9Y4L5 304 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 BORCS7-ASMTA0A0B4J1R7 106 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
CDK5RAP1-202ENST00000346416 CASP6P55212 293 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms