RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 USF1P22415 310 aaPredicted RBP9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 IL3RAP26951 378 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 MEOX1P50221 254 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 RTL8BQ17RB0 113 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
RPL28-201ENST00000344063 C1QL2Q7Z5L3 287 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 FBLN5Q9UBX5 448 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 THSD7BQ9C0I4 1608 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 CEP250Q9BV73 2442 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 SOD3P08294 240 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 PSG2P11465 335 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 RAB7AP51149 207 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 TUSC5Q8IXB3 177 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
RPL28-201ENST00000344063 NPIPB7O75200 414 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 GCGP01275 180 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 RTP5Q14D33 572 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 COL5A1-AS1Q5SY13 56 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 C10orf128Q5T292 105 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CPEB3Q8NE35 698 aaKnown RBP9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT55Q8WUE5 264 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 M0R1X1 148 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
RPL28-201ENST00000344063 RTBDNQ9BSG5 229 aaPredicted RBP9.41□□□□□ -0.9
RPL28-201ENST00000344063 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 IGHV3-43A0A0B4J1X8 118 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 LOC390937A0A1W2PQ73 354 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 DIRC3C9JPN6 131 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 IGHV3-43DP0DP04 118 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 UBE2G1P62253 170 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
RPL28-201ENST00000344063 RIPPLY2Q5TAB7 128 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 SPINK14Q6IE38 97 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 APC2O95996 2303 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 IGKV1D-43A0A0B4J1Z2 117 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 F8VVB4 439 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 F8VWA3 439 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT45A6P0DMU7 189 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT45A5P0DMU8 189 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT45A7P0DMV0 189 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 FGF12P61328 243 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CCL20P78556 96 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 HLA-DRB5Q30154 266 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT45A1Q5HYN5 189 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 CT45A3Q8NHU0 189 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 ANAPC16Q96DE5 110 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 FAM122AQ96E09 287 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 MANBALQ9NQG1 85 aa9.41□□□□□ -0.9
RPL28-201ENST00000344063 FGF5P12034 268 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 F2RP25116 425 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 SPCS3P61009 180 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 BTNL3Q6UXE8 466 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 H1FXQ92522 213 aaKnown RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 RBKSQ9H477 322 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 FSCN3Q9NQT6 498 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 ENSAO43768 121 aaKnown RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 HRASP01112 189 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 OR5G3P0C626 314 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 MPLP40238 635 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 UCP3P55916 312 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 HIKESHIQ53FT3 197 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 CDCP2Q5VXM1 449 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 ZBTB34Q8NCN2 500 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 DNASE2BQ8WZ79 361 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 TP53RKQ96S44 253 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 PSG11Q9UQ72 335 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 CHEK1O14757 476 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 MEF2BQ02080 365 aaPredicted RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 COL10A1Q03692 680 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
RPL28-201ENST00000344063 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 RTN4RL2Q86UN3 420 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 RFNGQ9Y644 331 aa9.4□□□□□ -0.9
RPL28-201ENST00000344063 ICE1Q9Y2F5 2266 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 LRRC3CA6NJW4 275 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 C9JQL5 133 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.91
RPL28-201ENST00000344063 CXCL1P09341 107 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 MPZP25189 248 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 PMELP40967 661 aa9.4□□□□□ -0.91
RPL28-201ENST00000344063 SERF2P84101 59 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms