RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TPTE2P1Q5T6R2 138 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 PRR18Q8N4B5 295 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 OR4F5Q8NH21 305 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 OR51H1Q8NH63 302 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 THOC3Q96J01 351 aaKnown RBP8.21□□□□□ -1.1
HOXA1-201ENST00000343060 OR4F4Q96R69 305 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 TBX15Q96SF7 602 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 C1QTNF5Q9BXJ0 243 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 OR2H1Q9GZK4 316 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 SLC25A22Q9H936 323 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 CHODLQ9H9P2 273 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 LPAR2Q9HBW0 351 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 TMEM106BQ9NUM4 274 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 IL17BQ9UHF5 180 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 A6NNC1 897 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 HS3ST1O14792 307 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 DNPH1O43598 174 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 NUPR1O60356 82 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 IGLV2-14P01704 120 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 NPPCP23582 126 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 CD27P26842 260 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 YPEL3P61236 119 aaPredicted RBP8.21□□□□□ -1.1
HOXA1-201ENST00000343060 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
HOXA1-201ENST00000343060 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 LINC00596Q86U02 117 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 WFIKKN1Q96NZ8 548 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 PRDM14Q9GZV8 571 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 TNRC6AQ8NDV7 1962 aaKnown RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 DEGS1O15121 323 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 GCH1P30793 250 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 TNFSF10P50591 281 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 PAFAH1B2P68402 229 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 CCL7P80098 99 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 HYAL1Q12794 435 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ATP6V1FQ16864 119 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 TMEM249Q2WGJ8 235 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF585BQ52M93 769 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 FAM78BQ5VT40 261 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 PRAMEF20Q5VT98 475 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 COLCA1Q6ZS62 124 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 OR10V1Q8NGI7 309 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 GATAD1Q8WUU5 269 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 CLDN23Q96B33 292 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 HS3ST6Q96QI5 342 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 TMEM147Q9BVK8 224 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 PCED1AQ9H1Q7 454 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 MTIF3Q9H2K0 278 aaKnown RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 TMEM9BQ9NQ34 198 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 REV3LO60673 3130 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ASXL3Q9C0F0 2248 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 IGHV1OR15-9A0A0B4J2B8 117 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 A0A1B0GUS0 222 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ZIC3O60481 467 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 LIFP15018 202 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 SOX8P57073 446 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 LINC00310P59036 64 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 TESK1Q15569 626 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 WDR74Q6RFH5 385 aaPredicted RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF705AQ6ZN79 300 aaPredicted RBP8.2□□□□□ -1.1
HOXA1-201ENST00000343060 Q6ZWC4 215 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 CMTM2Q8TAZ6 248 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 HLA-CQ95604 372 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 SRXN1Q9BYN0 137 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 WNT16Q9UBV4 365 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 EML6Q6ZMW3 1958 aa8.2□□□□□ -1.1
HOXA1-201ENST00000343060 A0A0J9YW62 118 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 PDGFBP01127 241 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 UMODP07911 640 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 B4GALT1P15291 398 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 WNT5AP41221 380 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 DSCR4P56555 118 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 PCBD1P61457 104 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 VWC2Q2TAL6 325 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 SPANXN5Q5MJ07 72 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF468Q5VIY5 522 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 C20orf204Q6ZNR8 217 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 BATF2Q8N1L9 274 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 FGFBP3Q8TAT2 258 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 OR5P3Q8WZ94 311 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 SDSLQ96GA7 329 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 DIRC2Q96SL1 478 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 LIN7CQ9NUP9 197 aaKnown RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 TP53TG3Q9ULZ0 132 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 YLPM1P49750 1951 aaKnown RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 A0A0U1RQK1 487 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF320A2RRD8 509 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 PMS2P5A8MQ11 134 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
HOXA1-201ENST00000343060 PAGE4O60829 102 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 SERPINA7P05543 415 aa8.19□□□□□ -1.1
HOXA1-201ENST00000343060 CYC1P08574 325 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms