RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DPRXA6NFQ7 191 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 DRD1P21728 446 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 MSR1P21757 451 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 DYRK2Q92630 601 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 LSM10Q969L4 123 aaKnown RBP15.82■□□□□ 0.12
SMPD1-201ENST00000342245 TXNDC17Q9BRA2 123 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 RBM24Q9BX46 236 aaKnown RBP15.82■□□□□ 0.12
SMPD1-201ENST00000342245 DOCK8Q8NF50 2099 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 OTOL1A6NHN0 477 aaPredicted RBP15.82■□□□□ 0.12
SMPD1-201ENST00000342245 PAGE4O60829 102 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 ARR3P36575 388 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 GAB4Q2WGN9 574 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 DMRTC1Q5HYR2 192 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 KIAA0895LQ68EN5 471 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 PRR27Q6MZM9 219 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 PET117Q6UWS5 81 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 LHFPL2Q6ZUX7 228 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 Q6ZVH6 145 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 OR10G9Q8NGN4 311 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 OR10G7Q8NGN6 311 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 PNO1Q9NRX1 252 aaKnown RBP15.82■□□□□ 0.12
SMPD1-201ENST00000342245 RNF24Q9Y225 148 aa15.82■□□□□ 0.12
SMPD1-201ENST00000342245 ARID1BQ8NFD5 2236 aaPredicted RBP15.81■□□□□ 0.12
SMPD1-201ENST00000342245 NPIPA2E9PIF3 369 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 C17orf112F2Z3M2 114 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 COX5AP20674 150 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 COX19Q49B96 90 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 CDCP2Q5VXM1 449 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 ZIC4Q8N9L1 334 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 KCNS1Q96KK3 526 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 KCNIP2Q9NS61 270 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 IL19Q9UHD0 177 aa15.81■□□□□ 0.12
SMPD1-201ENST00000342245 IGKV1D-33P01593 117 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 IGKV1-33P01594 117 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 IGKV3-11P04433 115 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 CTXN2P0C2S0 81 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 ZNF90Q03938 601 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 ARL16Q0P5N6 197 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 HLA-DRB5Q30154 266 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 C16orf54Q6UWD8 224 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 MUC15Q8N387 334 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 CRISPLD2Q9H0B8 497 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 SLC25A22Q9H936 323 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 PLA2G3Q9NZ20 509 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 LIPT2A6NK58 231 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 C17orf51A8MQB3 221 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 SIRPB1O00241 398 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 MT-ND6P03923 174 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 ANOS1P23352 680 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 TMEM249Q2WGJ8 235 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 DEFB110Q30KQ9 67 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 SNAI3Q3KNW1 292 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 RAET1LQ5VY80 246 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 RD3Q7Z3Z2 195 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 OR10G8Q8NGN5 311 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 MRGPRX1Q96LB2 322 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 IL36BQ9NZH7 164 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 SH3BGRL2Q9UJC5 107 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 CACNA1IQ9P0X4 2223 aa15.8■□□□□ 0.12
SMPD1-201ENST00000342245 LRP5LA4QPB2 252 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 E9PLN8 166 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 TRAF3IP2O43734 574 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 ANGPTL7O43827 346 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 CBLN1P23435 193 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 S100A7P31151 101 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 CDAP32320 146 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 HAPLN4Q86UW8 402 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 Q8NFD4 153 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 CCL4L1Q8NHW4 92 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 BCL2L2Q92843 193 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 FAM103A1Q9BTL3 118 aaKnown RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 GNB1LQ9BYB4 327 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 KIAA2026Q5HYC2 2103 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 HNRNPA2B1P22626 353 aaKnown RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 AMTP48728 403 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 SLC38A11Q08AI6 406 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 MYPOPQ86VE0 399 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 GJC3Q8NFK1 279 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 MMABQ96EY8 250 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 LRFN3Q9BTN0 628 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 ZNF442Q9H7R0 627 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 ZNF430Q9H8G1 570 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-201ENST00000342245 RNF114Q9Y508 228 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 CHD7Q9P2D1 2997 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 C5orf42Q9H799 3197 aa15.79■□□□□ 0.12
SMPD1-201ENST00000342245 UBE2L5PA0A1B0GUS4 154 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 SLC22A20A6NK97 555 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 CD300LBA8K4G0 201 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 C1QTNF9BB2RNN3 333 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 FCN1O00602 326 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 TUSC2O75896 110 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 S1PR2O95136 353 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 SERPINE2P07093 398 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 F2RP25116 425 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 SUMO3P55854 103 aaPredicted RBP15.78■□□□□ 0.12
SMPD1-201ENST00000342245 STUMQ69YW2 141 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 KLHDC7BQ96G42 594 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 TRAV34A0A0B4J273 112 aa15.78■□□□□ 0.12
SMPD1-201ENST00000342245 SPRY1O43609 319 aaPredicted RBP15.78■□□□□ 0.12
SMPD1-201ENST00000342245 NPPCP23582 126 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms