RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SLC38A9Q8NBW4 561 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF738Q8NE65 137 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 OR4C3Q8NH37 302 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 MMABQ96EY8 250 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-202ENST00000339438 SPACA5Q96QH8 159 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 ST6GALNAC5Q9BVH7 336 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM9BQ9NQ34 198 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 SLC7A11Q9UPY5 501 aa4.77□□□□□ -1.65
CSDE1-202ENST00000339438 IGHV5-10-1A0A0J9YXX1 117 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 IGHG1P01857 330 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 AMY2BP19961 511 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 DUSP1P28562 367 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 TSPOP30536 169 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 DNASE1L1P49184 302 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PIGPP57054 158 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 RPL19P84098 196 aaKnown RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 TRIP6Q15654 476 aaKnown RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 BSXQ3C1V8 233 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF324BQ6AW86 544 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 SLC18B1Q6NT16 456 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 MRPL14Q6P1L8 145 aaKnown RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 GUSBP11Q6P575 273 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 GLIPR1L1Q6UWM5 242 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 OR10G8Q8NGN5 311 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 OR2T10Q8NGZ9 312 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 NT5CQ8TCD5 201 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 THAP3Q8WTV1 239 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CORO2AQ92828 525 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZFYVE21Q9BQ24 234 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 RAB11FIP5Q9BXF6 653 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PECRQ9BY49 303 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF552Q9H707 407 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 VDAC3Q9Y277 283 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 KIR2DS5A0A0G2JLQ3 304 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 A0A0G2JNG1 304 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PRSS37A4D1T9 235 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 KIR2DS3K7RE56 304 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 HRKO00198 91 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 SERF1AO75920 110 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 HBE1P02100 147 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 H2BFMP0C1H6 154 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CT45A8P0DMV1 189 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CT45A9P0DMV2 189 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 DTYMKP23919 212 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF93P35789 620 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PAFAH1B2P68402 229 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 KIR2DS5Q14953 304 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CT45A2Q5DJT8 189 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 MYO7BQ6PIF6 2116 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 SULF2Q8IWU5 870 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 OR4B1Q8NGF8 309 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 VSTM2LQ96N03 204 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF700Q9H0M5 742 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF701Q9NV72 531 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 TANC2Q9HCD6 1990 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 GRIFINA4D1Z8 144 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ZFP92A6NM28 416 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 TAX1BP3O14907 124 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 IGKV1D-33P01593 117 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 IGKV1-33P01594 117 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PSG1P11464 419 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 ECI1P42126 302 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CSNK2A1P68400 391 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 TCF23Q7RTU1 214 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CSNK2A3Q8NEV1 391 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 CMTM2Q8TAZ6 248 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 GNPNAT1Q96EK6 184 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-202ENST00000339438 HSPB9Q9BQS6 159 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 PLEKHF2Q9H8W4 249 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 RNF24Q9Y225 148 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 MED12Q93074 2177 aa4.76□□□□□ -1.65
CSDE1-202ENST00000339438 IGHV1OR21-1A0A087WYE8 117 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 IGKV1D-43A0A0B4J1Z2 117 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM150CB9EJG8 249 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TGFBR3LH3BV60 316 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 KLF7O75840 302 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 IGHMP01871 453 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 FTH1P19P0C7X4 201 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF41P51814 821 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ID3Q02535 119 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 FOXL1Q12952 345 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 MUC15Q8N387 334 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 NEUROG1Q92886 237 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ANAPC16Q96DE5 110 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 HDHD3Q9BSH5 251 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 CLN8Q9UBY8 286 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PPIAL4EA0A075B759 164 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PPIAL4CA0A0B4J2A2 164 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 IGHV1-69-2A0A0G2JMI3 117 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 A0A0J9YY10 115 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 NKX2-6A6NCS4 301 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM8BA6NDV4 472 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 C17orf105B2RV13 164 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PPIAL4DF5H284 164 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF205O95201 554 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PPIAL4FP0DN26 164 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PSG4Q00888 419 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms