RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZNF251Q9BRH9 671 aa13.95□□□□□ -0.18
CMTM1-204ENST00000336328 URM1Q9BTM9 101 aaKnown RBP13.95□□□□□ -0.18
CMTM1-204ENST00000336328 FAAP24Q9BTP7 215 aa13.95□□□□□ -0.18
CMTM1-204ENST00000336328 TM2D1Q9BX74 207 aa13.95□□□□□ -0.18
CMTM1-204ENST00000336328 PLEKHJ1Q9NW61 149 aa13.95□□□□□ -0.18
CMTM1-204ENST00000336328 IGHG4P01861 327 aa13.94□□□□□ -0.18
CMTM1-204ENST00000336328 MMDQ15546 238 aa13.94□□□□□ -0.18
CMTM1-204ENST00000336328 OR6M1Q8NGM8 313 aa13.94□□□□□ -0.18
CMTM1-204ENST00000336328 CHMP1AQ9HD42 196 aaPredicted RBP13.94□□□□□ -0.18
CMTM1-204ENST00000336328 PIPOXQ9P0Z9 390 aa13.94□□□□□ -0.18
CMTM1-204ENST00000336328 ZNF107Q9UII5 783 aaPredicted RBP13.94□□□□□ -0.18
CMTM1-204ENST00000336328 MGAT4AQ9UM21 535 aa13.94□□□□□ -0.18
CMTM1-204ENST00000336328 ERICH4A6NGS2 130 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 K7EIL1 84 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 SLC22A1O15245 554 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 RAMP3O60896 148 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 ARL6IP5O75915 188 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 RPLP1P05386 114 aaKnown RBP13.93□□□□□ -0.18
CMTM1-204ENST00000336328 UCHL1P09936 223 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 PSMA1P25786 263 aaKnown RBP13.93□□□□□ -0.18
CMTM1-204ENST00000336328 BLVRBP30043 206 aaPredicted RBP13.93□□□□□ -0.18
CMTM1-204ENST00000336328 PPP1CCP36873 323 aaKnown RBP13.93□□□□□ -0.18
CMTM1-204ENST00000336328 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 TMEM65Q6PI78 240 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 MOB1BQ7L9L4 216 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 SULT4A1Q9BR01 284 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 ISYNA1Q9NPH2 558 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 KIAA1456Q9P272 454 aa13.93□□□□□ -0.18
CMTM1-204ENST00000336328 RAB29O14966 203 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
CMTM1-204ENST00000336328 PSMD7P51665 324 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 ACTBP60709 375 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 TPBGQ13641 420 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 INSL4Q14641 139 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 HMGN3Q15651 99 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 FAM27D1Q5T7N8 215 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 OR10K2Q6IF99 312 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 ZNF833PQ6ZTB9 187 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 C18orf65Q6ZTR6 163 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 C6orf201Q7Z4U5 140 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 OR5M8Q8NGP6 311 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 IL1F10Q8WWZ1 152 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 NABP2Q9BQ15 211 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 PLGRKTQ9HBL7 147 aa13.92□□□□□ -0.18
CMTM1-204ENST00000336328 LSM2Q9Y333 95 aaKnown RBP13.92□□□□□ -0.18
CMTM1-204ENST00000336328 TMEM14DPA8MWL7 114 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 ARSBP15848 533 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 MC5RP33032 325 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 RAB25P57735 213 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 DGCR2P98153 550 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 IRF3Q14653 427 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 GNMTQ14749 295 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 LIPKQ5VXJ0 399 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 LIN54Q6MZP7 749 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 ODF3L1Q8IXM7 274 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 RAX2Q96IS3 184 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 KCTD7Q96MP8 289 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 HSPB9Q9BQS6 159 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
CMTM1-204ENST00000336328 TRBV6-6A0A0A6YYG2 114 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 WI2-2373I1.2A0A1W2PRP0 233 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 NBR2O15453 112 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 RGS10O43665 173 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 NAPSAO96009 420 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 HSMCR30P0CW71 290 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 SLC2A2P11168 524 aaPredicted RBP13.9□□□□□ -0.18
CMTM1-204ENST00000336328 PSMB8P28062 276 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 CFHR3Q02985 330 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 C9orf66Q5T8R8 295 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 NPBQ8NG41 125 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 EDARADDQ8WWZ3 215 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 TMEM203Q969S6 136 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 MRPL20Q9BYC9 149 aaKnown RBP13.9□□□□□ -0.18
CMTM1-204ENST00000336328 OR51J1Q9H342 316 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 SLC23A1Q9UHI7 598 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 HSF4Q9ULV5 492 aa13.9□□□□□ -0.18
CMTM1-204ENST00000336328 SLC17A2O00624 439 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 HSPA12AO43301 675 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 MYF6P23409 242 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 ZBTB25P24278 435 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 QRFPP83859 136 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 UNC119Q13432 240 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 C5orf64Q2M2E5 130 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 VAX1Q5SQQ9 334 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 SVOPQ8N4V2 548 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 FAM89BQ8N5H3 189 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 RNF5Q99942 180 aa13.89□□□□□ -0.19
CMTM1-204ENST00000336328 SAA2-SAA4A0A096LPE2 208 aa13.88□□□□□ -0.19
CMTM1-204ENST00000336328 OR5H14A6NHG9 310 aa13.88□□□□□ -0.19
CMTM1-204ENST00000336328 RBBP9O75884 186 aa13.88□□□□□ -0.19
CMTM1-204ENST00000336328 SAA2P0DJI9 122 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms