RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FAM96BQ9Y3D0 163 aa11.43□□□□□ -0.58
APOBEC3B-202ENST00000335760 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
APOBEC3B-202ENST00000335760 BUB1B-PAK6H3BSN5 160 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 PTBP1P26599 531 aaKnown RBP eCLIP11.42□□□□□ -0.583e-11■■■■■ 45.4
APOBEC3B-202ENST00000335760 HLA-DMAP28067 261 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 LY6G6FQ5SQ64 297 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 LYSMD2Q8IV50 215 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 OR2AK2Q8NG84 335 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 OR5AP2Q8NGF4 316 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 SMIM4Q8WVI0 70 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 ABHD14AQ9BUJ0 271 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 NECAP2Q9NVZ3 263 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 RDH8Q9NYR8 311 aa11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 AMMECR1Q9Y4X0 333 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3B-202ENST00000335760 MDFIC2A0A1B0GVS7 189 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 GSTZ1O43708 216 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 PMP2P02689 132 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 OR3A3P47888 321 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ACTBP60709 375 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ACTG1P63261 375 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 CDK10Q15131 360 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ZNF79Q15937 498 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 MINOS1Q5TGZ0 78 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 OR5H2Q8NGV7 314 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 CREB3L1Q96BA8 519 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 AJUBAQ96IF1 538 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 C11orf54Q9H0W9 315 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 HILPDAQ9Y5L2 63 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 MINOS1-NBL1R4GNA1 71 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ST8SIA5O15466 376 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 FBP1P09467 338 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 OR5H8P0DN80 308 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 NFYAP23511 347 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 PAX6P26367 422 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 HRH1P35367 487 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 CEACAM3P40198 252 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 TAS2R46P59540 309 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 SSX2Q16385 188 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 LINC00299Q6ZSB3 139 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 H1FOOQ8IZA3 346 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 EDARADDQ8WWZ3 215 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 MALSU1Q96EH3 234 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 EHFQ9NZC4 300 aa11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 RBMX2Q9Y388 322 aaKnown RBP11.41□□□□□ -0.58
APOBEC3B-202ENST00000335760 TEP1Q99973 2627 aaKnown RBP11.4□□□□□ -0.58
APOBEC3B-202ENST00000335760 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.58
APOBEC3B-202ENST00000335760 LY6LH3BQJ8 138 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 J3QRK9 145 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 ITGB1BP1O14713 200 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 LANCL1O43813 399 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 IL3RAP26951 378 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 RFX2P48378 723 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 RAB7AP51149 207 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 SSBP1Q04837 148 aaKnown RBP11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 Q8N402 240 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 SIGLECL1Q8N7X8 197 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 TMEM229BQ8NBD8 167 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 RPEQ96AT9 228 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 SRRQ9GZT4 340 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 IFI27L2Q9H2X8 130 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 AKIP1Q9NQ31 210 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 RNF150Q9ULK6 438 aa11.4□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZFHX3Q15911 3703 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF736B4DX44 427 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 M0QYG6 137 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 CD3DP04234 171 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 CSF1P09603 554 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR8U9P0C7N5 309 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 FCGR2CP31995 323 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 TAS2R19P59542 299 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 ZNF45Q02386 682 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 DYRK1AQ13627 763 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 TUSC1Q2TAM9 212 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 PLA1AQ53H76 456 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 ACTBL2Q562R1 376 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 OVCH2Q7RTZ1 564 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 MFSD4AQ8N468 514 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 OR8U1Q8NH10 309 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 TOMM40LQ969M1 308 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 ABHD14BQ96IU4 210 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 MEGF9Q9H1U4 602 aa11.39□□□□□ -0.59
APOBEC3B-202ENST00000335760 RBM7Q9Y580 266 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms