RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 C10orf35Q96D05 121 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 LPAR2Q9HBW0 351 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 MBD1Q9UIS9 605 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-201ENST00000334504 LYZL6O75951 148 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 LRRC75BQ2VPJ9 315 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 AUP1Q9Y679 476 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 J3QR06 171 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 PEX11BO96011 259 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 IGHV4-34P06331 123 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 PLAURQ03405 335 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 HARBI1Q96MB7 349 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 IP6K3Q96PC2 410 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 PHF7Q9BWX1 381 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-201ENST00000334504 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
COL4A6-201ENST00000334504 WNT5BQ9H1J7 359 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 HSPB7Q9UBY9 170 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 SPCS1Q9Y6A9 102 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-201ENST00000334504 Q5BKY6 102 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 Q6ZNB5 142 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 VSTM2LQ96N03 204 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 OR8B2Q96RD0 313 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 SYNGR1O43759 233 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 CEACAM3P40198 252 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 ANKRD37Q7Z713 158 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 OR8G5Q8NG78 346 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 RBKSQ9H477 322 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 RNF122Q9H9V4 155 aa8.55□□□□□ -1.04
COL4A6-201ENST00000334504 FCGR3AP08637 254 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 C16orf47Q6ZP98 133 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 ZPBPQ9BS86 351 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 CDIPTO14735 213 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TSPAN2O60636 221 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 CCL7P80098 99 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 GLRX2Q9NS18 164 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 CTSVO60911 334 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 HYPMO75409 117 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 WDR34Q96EX3 536 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 KLHDC2Q9Y2U9 406 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TRBV9A0A0B4J1U6 114 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TMPRSS2O15393 492 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM177Q53S58 311 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 ATG4DQ86TL0 474 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 C10orf111Q8N326 155 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 LINC01555Q8NAE3 123 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 OR4D5Q8NGN0 318 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 OR1L8Q8NGR8 309 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 SFRP2Q96HF1 295 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TINAGQ9UJW2 476 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 C2CD4DB7Z1M9 353 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 KIR3DL2P43630 455 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 P2RY4P51582 365 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 H2BFSP57053 126 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 NANOS3P60323 173 aaKnown RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 MEF2CQ06413 473 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 RFLNBQ8N5W9 214 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 LINC00470Q9BZP3 86 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TGFAP01135 160 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 LINC01465Q8N7H1 131 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 ZNF441Q8N8Z8 693 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 TAF15Q92804 592 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 ABHD14BQ96IU4 210 aa8.54□□□□□ -1.04
COL4A6-201ENST00000334504 MRPS18AQ9NVS2 196 aaKnown RBP8.54□□□□□ -1.04
COL4A6-201ENST00000334504 C9orf172C9J069 976 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 CBLN1P23435 193 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 RBM11P57052 281 aaKnown RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 VAX1Q5SQQ9 334 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 MIC13Q5XKP0 118 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 APCDD1LQ8NCL9 501 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 ANAPC13Q9BS18 74 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 A0A1W2PPE3 182 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 NUBP1P53384 320 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 GAB4Q2WGN9 574 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 TMEM95Q3KNT9 176 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 TM4SF20Q53R12 229 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 CXorf66Q5JRM2 361 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 JKAMPQ9P055 326 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 PGPA6NDG6 321 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 PLAUP00749 431 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 DANCRP0C864 163 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 ARL14EPLP0DKL9 152 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 FHITP49789 147 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 RABAC1Q9UI14 185 aa8.53□□□□□ -1.04
COL4A6-201ENST00000334504 SMAD7O15105 426 aaKnown RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 GCM2O75603 506 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-201ENST00000334504 TYMSP04818 313 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms