RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PCGF1Q9BSM1 259 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 PLXNB3Q9ULL4 1909 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 LINC00869P0C866 280 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 WDR25Q64LD2 544 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 TBL2Q9Y4P3 447 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 GJB3O75712 270 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 TMPRSS3P57727 454 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 LYG1Q8N1E2 194 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 TAAR3PQ9P1P4 343 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 HOXB3P14651 431 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 OTX1P32242 354 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 GPR3P46089 330 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 LGALS7P47929 136 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 C1orf185Q5T7R7 199 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM219AQ8IW50 185 aa9.14□□□□□ -0.95
SPTBN1-201ENST00000333896 MC5RP33032 325 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 KIR3DL2P43630 455 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 LIM2P55344 173 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 RRN3P1Q2M238 152 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM53AQ6NSI3 398 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 ARSAP15289 507 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 MRGPREQ86SM8 312 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 RBKSQ9H477 322 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 LY75O60449 1722 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 TCRBV5S1A1TA0A578 114 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 TRAV30A0A087WSZ9 112 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 SPRY3O43610 288 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 APOMO95445 188 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 CA6P23280 308 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 DMKNQ6E0U4 476 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 ZNF774Q6NX45 483 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 FADS6Q8N9I5 356 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 NAT6Q93015 286 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 SHISA4Q96DD7 197 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1B0GWB2 263 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 NRG2O14511 850 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 OR4P4Q8NGL7 312 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 SARGQ9BW04 601 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 WNT5BQ9H1J7 359 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 COL24A1Q17RW2 1714 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 LDLRAD4O15165 306 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 ADRA2AP08913 450 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 NKAIN4Q8IVV8 208 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 SLC6A13Q9NSD5 602 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 AURKAIP1Q9NWT8 199 aaPredicted RBP9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 TUBD1Q9UJT1 453 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 KCNMB2Q9Y691 235 aa9.13□□□□□ -0.95
SPTBN1-201ENST00000333896 DENND4CQ5VZ89 1909 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 FAM157CP0CG43 387 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 TIMM23BQ5SRD1 257 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 ST8SIA1Q92185 356 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 UBE2ZQ9H832 354 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 HS3ST2Q9Y278 367 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 MKRN2OSH3BPM6 223 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 CDC14BO60729 498 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 MVDP53602 400 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 TMEM207Q6UWW9 146 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 CA13Q8N1Q1 262 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 SMIM8Q96KF7 97 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 SDF2Q99470 211 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 YBX1P67809 324 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 EWSR1Q01844 656 aaKnown RBP eCLIP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 RSPO3Q9BXY4 272 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 WNT16Q9UBV4 365 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 FZR1Q9UM11 496 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 PLPP1O14494 284 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 MPZL1O95297 269 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 GGTLC2Q14390 218 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 HSF5Q4G112 596 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 UMODP07911 640 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 PMELP40967 661 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 OLIG3Q7RTU3 272 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 TMEM45BQ96B21 275 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 NPFFR1Q9GZQ6 430 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 ZNF257Q9Y2Q1 563 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 GNG7O60262 68 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 ASB5Q8WWX0 329 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 GDE1Q9NZC3 331 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 A0A1W2PR80 420 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 C7orf71A4D174 169 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 C1SP09871 688 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 MEF2CQ06413 473 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 RGP1Q92546 391 aaPredicted RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 ARHGAP5-AS1Q96IT6 56 aa9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 DNAJB12Q9NXW2 375 aaKnown RBP9.12□□□□□ -0.95
SPTBN1-201ENST00000333896 TRAV21A0A0B4J279 112 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
SPTBN1-201ENST00000333896 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms