RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 GPR61Q9BZJ8 451 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 MS4A5Q9H3V2 200 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 RCC2Q9P258 522 aaKnown RBP9.22□□□□□ -0.93
CLN8-201ENST00000331222 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
CLN8-201ENST00000331222 FHL5Q5TD97 284 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 RHBDD2Q6NTF9 364 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 UNQ5815/PRO19632Q6UWF5 114 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 CLEC18BQ6UXF7 455 aa9.22□□□□□ -0.93
CLN8-201ENST00000331222 SIGLEC5O15389 551 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 PLPP2O43688 288 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 RELBQ01201 579 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 SIGLEC14Q08ET2 396 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 JMJD6Q6NYC1 403 aaPredicted RBP9.21□□□□□ -0.93
CLN8-201ENST00000331222 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 MRM2Q9UI43 246 aaKnown RBP9.21□□□□□ -0.93
CLN8-201ENST00000331222 DOCK10Q96BY6 2186 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 RGPD3A6NKT7 1758 aaPredicted RBP9.21□□□□□ -0.93
CLN8-201ENST00000331222 CEACAM18A8MTB9 384 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 NDUFB6O95139 128 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 ZNF707Q96C28 371 aaPredicted RBP9.21□□□□□ -0.93
CLN8-201ENST00000331222 MANBALQ9NQG1 85 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 KIF13BQ9NQT8 1826 aa9.21□□□□□ -0.93
CLN8-201ENST00000331222 LIPT2A6NK58 231 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 KLK8O60259 260 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 FCARP24071 287 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 ZNF56Q15929 161 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 NAT8Q9UHE5 227 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 C9JCJ5 164 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 SYNGR2O43760 224 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 MBPP02686 304 aaPredicted RBP9.21□□□□□ -0.94
CLN8-201ENST00000331222 INHBBP09529 407 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.94
CLN8-201ENST00000331222 DCAF10Q5QP82 559 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 DOCK8Q8NF50 2099 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 LDLRAD4O15165 306 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 RECKO95980 971 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 DLX6P56179 175 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 LCN2P80188 198 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 ITLN1Q8WWA0 313 aa9.21□□□□□ -0.94
CLN8-201ENST00000331222 MRPL13Q9BYD1 178 aaKnown RBP9.21□□□□□ -0.94
CLN8-201ENST00000331222 TBL2Q9Y4P3 447 aaKnown RBP9.21□□□□□ -0.94
CLN8-201ENST00000331222 K7N7A8 449 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MMP9P14780 707 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MAS1LP35410 378 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TMEM50BP56557 158 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 GAB4Q2WGN9 574 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 FOXB2Q5VYV0 432 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 OR1L8Q8NGR8 309 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 ITLN2Q8WWU7 325 aaPredicted RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 LPAR3Q9UBY5 353 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 CCL27Q9Y4X3 112 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TCF20Q9UGU0 1960 aaKnown RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 ERVFRD-1P60508 538 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 RSPO4Q2I0M5 234 aaPredicted RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 LYRM7Q5U5X0 104 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 SYT8Q8NBV8 401 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 hCG_38984A0A1B0GV85 526 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 HLA-DRB3P79483 266 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 ZNF658BQ4V348 819 aaPredicted RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 ZNF770Q6IQ21 691 aaPredicted RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 SLC35E3Q7Z769 313 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 OR2T10Q8NGZ9 312 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 PRSS27Q9BQR3 290 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MPC1Q9Y5U8 109 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 KIF26BQ2KJY2 2108 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TMEM189A5PLL7 270 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 PPYP01298 95 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 ZNF273Q14593 569 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 IL13RA2Q14627 380 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 OR4A47Q6IF82 309 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 WDFY1Q8IWB7 410 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 OR4D11Q8NGI4 311 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 KIAA2026Q5HYC2 2103 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 ZNF646O15015 1829 aaPredicted RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 ARRDC5A6NEK1 342 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 UPK3AO75631 287 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 C12orf73Q69YU5 71 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MRPL24Q96A35 216 aaKnown RBP9.2□□□□□ -0.94
CLN8-201ENST00000331222 TLNRD1Q9H1K6 362 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 SLC52A3Q9NQ40 469 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TRAV8-7A0A075B6U6 113 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MUC21A0A0G2JKD1 596 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MUC21A0A140T8X8 626 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 CLDN34H7C241 214 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 MUC21Q5SSG8 566 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 TEPPQ6URK8 271 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 WIPI2Q9Y4P8 454 aa9.2□□□□□ -0.94
CLN8-201ENST00000331222 SPTBN2O15020 2390 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 IGSF11Q5DX21 431 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 F12P00748 615 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms