RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SUMF2Q8NBJ7 301 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 ANKRD60Q9BZ19 345 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 PPIL3Q9H2H8 161 aaKnown RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 SCN3BQ9NY72 215 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 CLEC2DQ9UHP7 191 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 KIF25Q9UIL4 384 aa5.07□□□□□ -1.6
SMG1-201ENST00000330588 MRPS28Q9Y2Q9 187 aaKnown RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 LSM2Q9Y333 95 aaKnown RBP5.07□□□□□ -1.6
SMG1-201ENST00000330588 SVEP1Q4LDE5 3571 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 TRAV8-7A0A075B6U6 113 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 XKRY2A2RUG3 117 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 J3QR06 171 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 CCRL2O00421 344 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 BET1O15155 118 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 XPNPEP2O43895 674 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 OR7C1O76099 320 aaPredicted RBP5.06□□□□□ -1.6
SMG1-201ENST00000330588 CSF1P09603 554 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 CELP19835 753 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 MYF6P23409 242 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 GLP1RP43220 463 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 ZNF137PP52743 207 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 SNU13P55769 128 aaKnown RBP5.06□□□□□ -1.6
SMG1-201ENST00000330588 SLC35A2P78381 396 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 EMX1Q04741 257 aaPredicted RBP5.06□□□□□ -1.6
SMG1-201ENST00000330588 MADCAM1Q13477 382 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 EBI3Q14213 229 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 IRF3Q14653 427 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 ATXN7L3Q14CW9 347 aaPredicted RBP5.06□□□□□ -1.6
SMG1-201ENST00000330588 SPHARQ15513 63 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 LY6EQ16553 131 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 PIGYQ3MUY2 71 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 ZNF497Q6ZNH5 498 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 KLHDC1Q8N7A1 406 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 OR13A1Q8NGR1 328 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 PLPPR1Q8TBJ4 325 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 NRG4Q8WWG1 115 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 FAM192AQ9GZU8 254 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 CST11Q9H112 138 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 DUSP21Q9H596 190 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 ZNF286AQ9HBT8 521 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 TPRKBQ9Y3C4 175 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 LRRC42Q9Y546 428 aa5.06□□□□□ -1.6
SMG1-201ENST00000330588 TET2Q6N021 2002 aaPredicted RBP5.06□□□□□ -1.6
SMG1-201ENST00000330588 MCRIP1C9JLW8 97 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 C15orf65H3BRN8 121 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 GEMIN2O14893 280 aaKnown RBP5.05□□□□□ -1.6
SMG1-201ENST00000330588 FGF16O43320 207 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 SLC25A17O43808 307 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 MRPS14O60783 128 aaKnown RBP5.05□□□□□ -1.6
SMG1-201ENST00000330588 CDRT1O95170 752 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 UCHL1P09936 223 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 CALCBP10092 127 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 SERPINA2P20848 420 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 FUT3P21217 361 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 IL3RAP26951 378 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 SLC6A1P30531 599 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 SCN1BQ07699 218 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 TPBGQ13641 420 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 SAPCD1Q5SSQ6 148 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 C1orf100Q5SVJ3 147 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 GLT8D1Q68CQ7 371 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 PRSS48Q7RTY5 328 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 IZUMO1Q8IYV9 350 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 BPIFB6Q8NFQ5 453 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 OR10K1Q8NGX5 313 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 CAPSLQ8WWF8 208 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 TAF15Q92804 592 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMG1-201ENST00000330588 TOMM40LQ969M1 308 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 RPEQ96AT9 228 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 GPR61Q9BZJ8 451 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 ING3Q9NXR8 418 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 ING4Q9UNL4 249 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 HILPDAQ9Y5L2 63 aa5.05□□□□□ -1.6
SMG1-201ENST00000330588 A0A1W2PPI3 338 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 AIPO00170 330 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 PIN1P1O15428 100 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SPINT2O43291 252 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SSX5O60225 188 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 PDCD6O75340 191 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MT-ND4P03905 459 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 GAPDHP04406 335 aaKnown RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 MGMTP16455 207 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 VDAC2P45880 294 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 LOXL3P58215 753 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SRSF4Q08170 494 aaKnown RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 MLLT11Q13015 90 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 TBCEQ15813 527 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC22A6Q4U2R8 563 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RBM48Q5RL73 367 aaKnown RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 KPRPQ5T749 579 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 AWAT2Q6E213 333 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC25A24Q6NUK1 477 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 GLIPR1L1Q6UWM5 242 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC25A48Q6ZT89 311 aaKnown RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR2W3Q7Z3T1 314 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms