RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 C5orf66Q9H5L9 145 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 C14orf166Q9Y224 244 aaKnown RBP8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A087X0M5 115 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 A0A1B0GX30 115 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 DHFRP00374 187 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 RAB25P57735 213 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 TAS2R31P59538 309 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 LOXL1Q08397 574 aaPredicted RBP8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF439Q8NDP4 499 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 OR2AK2Q8NG84 335 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 SECTM1Q8WVN6 248 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF486Q96H40 463 aaPredicted RBP8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 FOXC2Q99958 501 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 RTBDNQ9BSG5 229 aaPredicted RBP8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 SUCNR1Q9BXA5 334 aa8.4□□□□□ -1.07
VIPAS39-201ENST00000327028 PRAF2O60831 178 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 ANXA7P20073 488 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 CD34P28906 385 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 ERVFRD-1P60508 538 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 MSMO1Q15800 293 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 C1orf122Q6ZSJ8 110 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 SLC25A42Q86VD7 318 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 C8orf31Q8N9H6 132 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 Q96MF0 132 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 ABHD14AQ9BUJ0 271 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 ALX4Q9H161 411 aaPredicted RBP8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 TMEM133Q9H2Q1 129 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 A0A0B4J293 547 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 IL5P05113 134 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 OR8U9P0C7N5 309 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 VSIG10L2P0DP72 767 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 RAB7AP51149 207 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 UTF1Q5T230 341 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 Q8N7P7 452 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 OR8U1Q8NH10 309 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 LEAP2Q969E1 77 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 TMEM230Q96A57 120 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 KCNS2Q9ULS6 477 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 PSG11Q9UQ72 335 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 RBM7Q9Y580 266 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 ARHGAP32A7KAX9 2087 aa8.39□□□□□ -1.07
VIPAS39-201ENST00000327028 GPR31O00270 319 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 SLC31A2O15432 143 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 PI3P19957 117 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 GNRHRP30968 328 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 RND3P61587 244 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ARF6P62330 175 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 TATDN3Q17R31 274 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ABCA11PQ4W5N1 156 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 FAHD2BQ6P2I3 314 aaPredicted RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF818PQ6ZRF7 136 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 SLC25A48Q6ZT89 311 aaKnown RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF645Q8N7E2 425 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ADAD2Q8NCV1 583 aaKnown RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 FAHD2AQ96GK7 314 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 AGMATQ9BSE5 352 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 REG4Q9BYZ8 158 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 OR2D2Q9H210 308 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 IFI27L2Q9H2X8 130 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 METTL8Q9H825 291 aaKnown RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 CREBBPQ92793 2442 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 A0A1B0GVG6 124 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 HSD17B6O14756 317 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 SLC22A5O76082 557 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 IGHV3-7P01780 117 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 GNG10P50151 68 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 DVL1P1P54792 670 aaPredicted RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 GLDNQ6ZMI3 551 aaPredicted RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 CCDC71LQ8N9Z2 235 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 BVESQ8NE79 360 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF596Q8TC21 504 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 AKR1E2Q96JD6 320 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 BEX2Q9BXY8 128 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 SIRPDQ9H106 197 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 BEX1Q9HBH7 125 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 LPAR2Q9HBW0 351 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 MMP26Q9NRE1 261 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 SLC2A9Q9NRM0 540 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF221Q9UK13 617 aa8.38□□□□□ -1.07
VIPAS39-201ENST00000327028 CCDC168Q8NDH2 2452 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 B4DSR2 109 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 IGLV2-14P01704 120 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 MSMBP08118 114 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 OR4E1P0C645 316 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 AKR1C4P17516 323 aa8.37□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF134P52741 427 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms