RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PHF3Q92576 2039 aaKnown RBP12.67□□□□□ -0.38
TCOF1-201ENST00000323668 TAF15Q92804 592 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCOF1-201ENST00000323668 P2RX4Q99571 388 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 CLN8Q9UBY8 286 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 TRGV10A0A0A0MS01 117 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 B4E171 279 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 TSPAN7P41732 249 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 UBE2G1P62253 170 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 ZADH2Q8N4Q0 377 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 OR8G5Q8NG78 346 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 OR2J1Q9GZK6 312 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
TCOF1-201ENST00000323668 MT-CO3P00414 261 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 HRASP01112 189 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 CCKARP32238 428 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 MPLP40238 635 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 GLIPR1P48060 266 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 SH3BGRL2Q9UJC5 107 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 M0R1B8 84 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 SCGB2A1O75556 95 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 UCP1P25874 307 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 ALKBH6Q3KRA9 238 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 C16orf82Q7Z2V1 217 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 RNF144BQ7Z419 303 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 IL36GQ9NZH8 169 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 FAM157CP0CG43 387 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 STARD6P59095 220 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 ZNF506Q5JVG8 444 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 SLC25A40Q8TBP6 338 aa12.66□□□□□ -0.38
TCOF1-201ENST00000323668 KRTDAPP60985 99 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
TCOF1-201ENST00000323668 IGHV3-13P01766 116 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 IGHV3-7P01780 117 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 OR5G3P0C626 314 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 SCCPDHQ8NBX0 429 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 OR10G8Q8NGN5 311 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
TCOF1-201ENST00000323668 LRFN3Q9BTN0 628 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 AESQ08117 197 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 GGACTQ9BVM4 153 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 FCN1O00602 326 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 GYPAP02724 150 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 SRP19P09132 144 aaKnown RBP12.65□□□□□ -0.38
TCOF1-201ENST00000323668 COX5BP10606 129 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 RAB4AP20338 218 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 GZMHP20718 246 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 DCAF10Q5QP82 559 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 LYG1Q8N1E2 194 aa12.65□□□□□ -0.38
TCOF1-201ENST00000323668 CISD1Q9NZ45 108 aaKnown RBP12.65□□□□□ -0.38
TCOF1-201ENST00000323668 COLCA2A8K830 154 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 SPRY3O43610 288 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 PDE6DO43924 150 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 PGA5P0DJD9 388 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 DECR2Q9NUI1 292 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 NAT8BQ9UHF3 227 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 OR2H2O95918 312 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CT45A6P0DMU7 189 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CT45A5P0DMU8 189 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CT45A7P0DMV0 189 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 HABP2Q14520 560 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CT45A1Q5HYN5 189 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CT45A3Q8NHU0 189 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 PKIBQ9C010 78 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 SH2D2AQ9NP31 389 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 SLC45A2Q9UMX9 530 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 RPL29P47914 159 aaKnown RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 LSM10Q969L4 123 aaKnown RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 MEGF10Q96KG7 1140 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 PARD6AQ9NPB6 346 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 DMRT1Q9Y5R6 373 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 RAB7AP51149 207 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 B2MP61769 119 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 TMEM251Q8N6I4 163 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 CMTM2Q8TAZ6 248 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 C18orf12Q96KH6 178 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 IMMP1LQ96LU5 166 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
TCOF1-201ENST00000323668 AURKAIP1Q9NWT8 199 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-201ENST00000323668 TRAV17A0A0B4J275 112 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 C21orf140B9A014 251 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 CLN5O75503 358 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-201ENST00000323668 FOSL1P15407 271 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 CSRP2Q16527 193 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 MYPOPQ86VE0 399 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-201ENST00000323668 C1orf210Q8IVY1 113 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms