RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FAM206AQ9NX38 181 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 RNASE1P07998 156 aaKnown RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 MIXL1Q9H2W2 232 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 DYNLRB2Q8TF09 96 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 NRIP2Q9BQI9 281 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 INSIG2Q9Y5U4 225 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 LY75O60449 1722 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 ADAMTSL1Q8N6G6 1762 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 SS18L1O75177 396 aaPredicted RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 HERPUD1Q15011 391 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 GPA33Q99795 319 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 ALX4Q9H161 411 aaPredicted RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 A0A1B0GV90 55 aa14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 RSPO2Q6UXX9 243 aaPredicted RBP14.78□□□□□ -0.04
SMCHD1-201ENST00000320876 LGALS3P17931 250 aaKnown RBP14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 ASB5Q8WWX0 329 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 H0Y980 276 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 MYOGP15173 224 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 KIAA0040Q15053 153 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 CCL28Q9NRJ3 127 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 J3KRW8 73 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 J3QR06 171 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 WNT5AP41221 380 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 RTN4RL1Q86UN2 441 aaPredicted RBP14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 MOB4Q9Y3A3 225 aa14.77□□□□□ -0.04
SMCHD1-201ENST00000320876 HLA-DRB1P01911 266 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 MESTQ5EB52 335 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 ANKRD33Q7Z3H0 272 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 PGLYRP3Q96LB9 341 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 MAP1LC3AQ9H492 121 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 ZFP64Q9NPA5 681 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 KCNMB2Q9Y691 235 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 SDK2Q58EX2 2172 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 SLC35B1P78383 322 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 MRPL18Q9H0U6 180 aaKnown RBP14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 ABHD14BQ96IU4 210 aa14.77□□□□□ -0.05
SMCHD1-201ENST00000320876 PEF1Q9UBV8 284 aaKnown RBP14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 NPIPB6E9PJ23 425 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 EDIL3O43854 480 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 HOXC4P09017 264 aaPredicted RBP14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 TMEM45BQ96B21 275 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 NPVFQ9HCQ7 196 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 NPBWR2P48146 333 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 PRSS8Q16651 343 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 HOGA1Q86XE5 327 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 LIPT2A6NK58 231 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 ISXQ2M1V0 245 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 LRRC75BQ2VPJ9 315 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 ACER2Q5QJU3 275 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 FOXQ1Q9C009 403 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 IL36RNQ9UBH0 155 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 HYPMO75409 117 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 MT-CO3P00414 261 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 ZNF79Q15937 498 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 TCFL5Q9UL49 500 aa14.76□□□□□ -0.05
SMCHD1-201ENST00000320876 GABRG2P18507 467 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 GUCA2BQ16661 112 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 A0A1W2PQD3 144 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 SPEM1Q8N4L4 309 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 METTL1Q9UBP6 276 aaKnown RBP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 CLN8Q9UBY8 286 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 MEX3AA1L020 520 aaKnown RBP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 RPL36A-HNRNPH2H7BZ11 118 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 PLA2G10O15496 165 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 SMIM13P0DJ93 91 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 TMEM78Q5T7P6 136 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 PCGF1Q9BSM1 259 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 HSPB7Q9UBY9 170 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 VAX1Q5SQQ9 334 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 MRAP2Q96G30 205 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 VCX2Q9H322 139 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 PXMP4Q9Y6I8 212 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 A0A0B4J293 547 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 HYAL3O43820 417 aaPredicted RBP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 EIF3GO75821 320 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 NDUFB4O95168 129 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 METTL26Q96S19 204 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 TMEM30AQ9NV96 361 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 KLK13Q9UKR3 277 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 SOX21Q9Y651 276 aaPredicted RBP14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 C7orf66A4D0T2 115 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 K7N7A8 449 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 CCDC144NLQ6NUI1 221 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 CADM4Q8NFZ8 388 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 OR10J6PQ8NGY7 276 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 RNF133Q8WVZ7 376 aa14.75□□□□□ -0.05
SMCHD1-201ENST00000320876 IL4P05112 153 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 PLA2G3Q9NZ20 509 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 WIPI2Q9Y4P8 454 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 PHLDA3Q9Y5J5 127 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 HPRT1P00492 218 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 ZNF273Q14593 569 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 TP53I13Q8NBR0 393 aaPredicted RBP14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 MYEOVQ96EZ4 313 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 OR2H1Q9GZK4 316 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 OR4C45A6NMZ5 311 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 SOD3P08294 240 aa14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 RPS20P60866 119 aaKnown RBP14.74□□□□□ -0.05
SMCHD1-201ENST00000320876 IRF3Q14653 427 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms