RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 BPIFB3P59826 476 aa14.35□□□□□ -0.11
PACS1-201ENST00000320580 C12orf54Q6X4T0 127 aa14.35□□□□□ -0.11
PACS1-201ENST00000320580 ZNF385AQ96PM9 386 aaKnown RBP14.35□□□□□ -0.11
PACS1-201ENST00000320580 VSIRQ9H7M9 311 aa14.35□□□□□ -0.11
PACS1-201ENST00000320580 A0A1W2PRS3 328 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 CHEK1O14757 476 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 F2RP25116 425 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 FHL1Q13642 323 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 RNF144BQ7Z419 303 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 MEGF9Q9H1U4 602 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 NRN1Q9NPD7 142 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.34□□□□□ -0.11
PACS1-201ENST00000320580 TOX3O15405 576 aaPredicted RBP14.34□□□□□ -0.11
PACS1-201ENST00000320580 ZNF207O43670 478 aaKnown RBP14.34□□□□□ -0.11
PACS1-201ENST00000320580 APCSP02743 223 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 GPM6AP51674 278 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 DEFB133Q30KQ1 61 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 TECRQ9NZ01 308 aaKnown RBP14.34□□□□□ -0.11
PACS1-201ENST00000320580 ZFAND5O76080 213 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 VENTXO95231 258 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 PATE4P0C8F1 98 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 B4GALT1P15291 398 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 TMEM171Q8WVE6 324 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 IGKV1D-43A0A0B4J1Z2 117 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 CHRDL1Q9BU40 450 aa14.34□□□□□ -0.11
PACS1-201ENST00000320580 CABIN1Q9Y6J0 2220 aa14.33□□□□□ -0.11
PACS1-201ENST00000320580 SCTP09683 121 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 RNASE8Q8TDE3 154 aaKnown RBP14.33□□□□□ -0.12
PACS1-201ENST00000320580 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 LHFPL6Q9Y693 200 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 C1QTNF9BB2RNN3 333 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 SLC17A3O00476 420 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 SMIM10L1P0DMW3 83 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 APOBEC3DQ96AK3 386 aaPredicted RBP14.33□□□□□ -0.12
PACS1-201ENST00000320580 SMIM10Q96HG1 83 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 Q96M66 194 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 PSMG3Q9BT73 122 aaPredicted RBP14.33□□□□□ -0.12
PACS1-201ENST00000320580 OR1A1Q9P1Q5 309 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 SRYQ05066 204 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 COX19Q49B96 90 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 WDFY1Q8IWB7 410 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 OR52L2PQ8NGH6 319 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 ORAOV1Q8WV07 137 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 C18orf12Q96KH6 178 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 TPPP3Q9BW30 176 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 CLN8Q9UBY8 286 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 HSPB7Q9UBY9 170 aa14.33□□□□□ -0.12
PACS1-201ENST00000320580 IFNL4K9M1U5 179 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 C1QTNF9P0C862 333 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 MRPL52Q86TS9 123 aaKnown RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 CPT1CQ8TCG5 803 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 GABRG3Q99928 467 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 QTRT1Q9BXR0 403 aaKnown RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 MED12Q93074 2177 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 TRAV39A0A0B4J263 110 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 FAM157AC9JC47 383 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 TNFSF14O43557 240 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 SRSF10O75494 262 aaKnown RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 NXPH2O95156 264 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 RSPO4Q2I0M5 234 aaPredicted RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 C1orf185Q5T7R7 199 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 VWA1Q6PCB0 445 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 LYPD6BQ8NI32 183 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 SELENOKQ9Y6D0 94 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 PRAMEF26H0Y7S4 382 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 M0QZ24 198 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 SNAI3Q3KNW1 292 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 AARDQ4LEZ3 155 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 ACTL10Q5JWF8 245 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 SLC25A34Q6PIV7 304 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 PARM1Q6UWI2 310 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 ZNF818PQ6ZRF7 136 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 MSI2Q96DH6 328 aaKnown RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 GMPPAQ96IJ6 420 aaPredicted RBP14.32□□□□□ -0.12
PACS1-201ENST00000320580 C20orf144Q9BQM9 153 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 TRAV38-1A0A0B4J264 116 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 PGPEP1LA6NFU8 196 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 RHBDL1O75783 438 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 MT-ND6P03923 174 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 OR8B8Q15620 311 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 SSMEM1Q8WWF3 244 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 GNG12Q9UBI6 72 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 FBLN5Q9UBX5 448 aa14.32□□□□□ -0.12
PACS1-201ENST00000320580 DUX1O43812 170 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 CEACAM8P31997 349 aaPredicted RBP14.31□□□□□ -0.12
PACS1-201ENST00000320580 GFERP55789 205 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 SOX8P57073 446 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 UBE2G1P62253 170 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 YPEL5P62699 121 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 BPIFA4PQ86YQ2 179 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 PLXDC1Q8IUK5 500 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 SHISA5Q8N114 240 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 LOXL4Q96JB6 756 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 NKX6-3A6NJ46 265 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 LIPT2A6NK58 231 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 FCER1GP30273 86 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 ASPHD2Q6ICH7 369 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 PET117Q6UWS5 81 aa14.31□□□□□ -0.12
PACS1-201ENST00000320580 OR1F12Q8NHA8 337 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms