RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 TMEM217Q8N7C4 229 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF764Q96H86 408 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF681Q96N22 645 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 HSPB9Q9BQS6 159 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 LMF2Q9BU23 707 aaKnown RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 BANF2Q9H503 90 aa8.06□□□□□ -1.12
CAPN3-201ENST00000318023 PATZ1Q9HBE1 687 aaKnown RBP8.06□□□□□ -1.12
CAPN3-201ENST00000318023 LOC102723971A0A1B0GUV8 181 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 H7BYZ3 331 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 YPEL1O60688 119 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 TOMM40O96008 361 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 IGKV3-11P04433 115 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 PSG1P11464 419 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 CTXN1P60606 82 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 CSNK2A1P68400 391 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-201ENST00000318023 ARFRP1Q13795 201 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 PLAC9Q5JTB6 97 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 BCORP1Q8N888 145 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 ST6GALNAC3Q8NDV1 305 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 CSNK2A3Q8NEV1 391 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM171Q8WVE6 324 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 YPEL2Q96QA6 119 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 OR5B12Q96R08 314 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 INTS1Q8N201 2190 aaKnown RBP8.05□□□□□ -1.12
CAPN3-201ENST00000318023 WISP1O95388 367 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 IGFBP3P17936 291 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-201ENST00000318023 HNRNPA3P51991 378 aaKnown RBP8.05□□□□□ -1.12
CAPN3-201ENST00000318023 FOXK1P85037 733 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 PSG6Q00889 435 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
CAPN3-201ENST00000318023 SRYQ05066 204 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 LYZL2Q7Z4W2 148 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 CMTM2Q8TAZ6 248 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 ABHD3Q8WU67 409 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 KLHL13Q9P2N7 655 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 ADAM29Q9UKF5 820 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 RTTNQ86VV8 2226 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 EML6Q6ZMW3 1958 aa8.05□□□□□ -1.12
CAPN3-201ENST00000318023 A0A0A6YYD4 124 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 TRAV39A0A0B4J263 110 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 IGHV2OR16-5A0A0B4J2B6 119 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SHISA8B8ZZ34 492 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 ZG16O60844 167 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MPIG6BO95866 241 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 RANP62826 216 aaKnown RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 ACOT6Q3I5F7 207 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 VAX1Q5SQQ9 334 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 LCN15Q6UWW0 184 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 OR5L1Q8NGL2 311 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 LPAR5Q9H1C0 372 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 EMC9Q9Y3B6 208 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 ITPR2Q14571 2701 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 LOC107986453A0A1B0GWG9 222 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MAP1LC3B2A6NCE7 125 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 ARPC3O15145 178 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 CST7O76096 145 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MGAT2Q10469 447 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SLC17A1Q14916 467 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 FBXW12Q6X9E4 464 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 YRDCQ86U90 279 aaKnown RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MYPOPQ86VE0 399 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SPACA9Q96E40 222 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SMIM7Q9BQ49 75 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MAP1LC3BQ9GZQ8 125 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MANBALQ9NQG1 85 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 CEBPZOSA8MTT3 80 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 IL12BP29460 328 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 NKX2-1P43699 371 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 MRPS34P82930 218 aaKnown RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 IGFL3Q6UXB1 125 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 RPRMLQ8N4K4 120 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 BOD1Q96IK1 185 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SCGB3A2Q96PL1 93 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 PYGO2Q9BRQ0 406 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 SF3B5Q9BWJ5 86 aaKnown RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 ELL3Q9HB65 397 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-201ENST00000318023 GPR84Q9NQS5 396 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
CAPN3-201ENST00000318023 LRRC3CA6NJW4 275 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CEACAM18A8MTB9 384 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 NXPH3O95157 252 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 CLPSP04118 112 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 TMEM225BP0DP42 221 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 RPS4Y1P22090 263 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 GDF1P27539 372 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 SNU13P55769 128 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 TGIF2LYQ8IUE0 185 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 FBXL14Q8N1E6 418 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 MDS2Q8NDY4 140 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 ZNF596Q8TC21 504 aa8.03□□□□□ -1.12
CAPN3-201ENST00000318023 PINX1Q96BK5 328 aaKnown RBP8.03□□□□□ -1.12
CAPN3-201ENST00000318023 RBMXL1Q96E39 390 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms