RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ID3Q02535 119 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 HSD17B13Q7Z5P4 300 aaPredicted RBP15.32■□□□□ 0.04
CCDC43-201ENST00000315286 ZNF645Q8N7E2 425 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 PLEKHF2Q9H8W4 249 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4Q9UBX2 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 ATRXP46100 2492 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 ODAMA1E959 279 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 K7N7A8 449 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 NXPH3O95157 252 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 GAPDHP04406 335 aaKnown RBP15.31■□□□□ 0.04
CCDC43-201ENST00000315286 TNFSF4P23510 183 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 EIF5AP63241 154 aaKnown RBP15.31■□□□□ 0.04
CCDC43-201ENST00000315286 NHLH2Q02577 135 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 IZUMO4Q1ZYL8 232 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 PPP1R35Q8TAP8 253 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 RNF141Q8WVD5 230 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 C5orf30Q96GV9 206 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 LIN7CQ9NUP9 197 aaKnown RBP15.31■□□□□ 0.04
CCDC43-201ENST00000315286 A8MXK9 166 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 LGALS8O00214 317 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 SSSCA1O60232 199 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 JTBO76095 146 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 CYB5R3P00387 301 aaPredicted RBP15.31■□□□□ 0.04
CCDC43-201ENST00000315286 EPHA1P21709 976 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 ADAM5Q6NVV9 412 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 SSX8Q7RTT4 187 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 TGIF2LYQ8IUE0 185 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 FAM222BQ8WU58 562 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 WFDC1Q9HC57 220 aa15.31■□□□□ 0.04
CCDC43-201ENST00000315286 FAM24AA6NFZ4 105 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 SPINT2O43291 252 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 PITX3O75364 302 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 KLRB1Q12918 225 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 TRAT1Q6PIZ9 186 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 Q6ZRM9 215 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 ZNF808Q8N4W9 903 aaPredicted RBP15.3■□□□□ 0.04
CCDC43-201ENST00000315286 EIF4E3Q8N5X7 224 aaKnown RBP15.3■□□□□ 0.04
CCDC43-201ENST00000315286 OR2C3Q8N628 320 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 ABHD14BQ96IU4 210 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 CHD8Q9HCK8 2581 aa15.3■□□□□ 0.04
CCDC43-201ENST00000315286 KALRNO60229 2985 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 PIGBOS1A0A0B4J2F0 54 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 DEFB108AA8MXU0 73 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 SELLP14151 372 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 GZMHP20718 246 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 LTC4SQ16873 150 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 CCDC28AQ8IWP9 274 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 ZCCHC24Q8N2G6 241 aaKnown RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 ZBTB34Q8NCN2 500 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 LRRC20Q8TCA0 184 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 LINC00052Q96N35 136 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 SESN1Q9Y6P5 492 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 A0A1B0GU03 582 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 SHOXO15266 292 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 IGKV1-5P01602 117 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 PVALBP20472 110 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 CCL8P80075 99 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 HTD2P86397 168 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 EIF4EBP1Q13541 118 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 CR1LQ2VPA4 569 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 UBAC2Q8NBM4 344 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 DEFB108BQ8NET1 73 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 RNASE11Q8TAA1 199 aaKnown RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 Q8TCH9 128 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 LSM10Q969L4 123 aaKnown RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 DCAF16Q9NXF7 216 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 PKDREJQ9NTG1 2253 aa15.29■□□□□ 0.04
CCDC43-201ENST00000315286 RAI1Q7Z5J4 1906 aaPredicted RBP15.29■□□□□ 0.04
CCDC43-201ENST00000315286 RNF212BA8MTL3 300 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 FBXO24O75426 580 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 TMEM50AO95807 157 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 SLC25A6P12236 298 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 CAV2P51636 162 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 EDDM3BP56851 147 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 EWSR1Q01844 656 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L9Q6RFH8 374 aaPredicted RBP15.28■□□□□ 0.04
CCDC43-201ENST00000315286 TAS2R3Q9NYW6 316 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 PLA2G2EQ9NZK7 142 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 DSCAML1Q8TD84 2053 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 NBASA2RRP1 2371 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 IGSF23A1L1A6 192 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 C17orf100A8MU93 164 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 CHST1O43916 411 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 ADH4P08319 380 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 CA7P43166 264 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 ASCL1P50553 236 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 CASP6P55212 293 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 STUMQ69YW2 141 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 EIF5AL1Q6IS14 154 aaKnown RBP15.28■□□□□ 0.04
CCDC43-201ENST00000315286 RNF115Q9Y4L5 304 aa15.28■□□□□ 0.04
CCDC43-201ENST00000315286 NCOR2Q9Y618 2525 aa15.27■□□□□ 0.04
CCDC43-201ENST00000315286 KIAA1324LA8MWY0 1029 aaPredicted RBP15.27■□□□□ 0.03
CCDC43-201ENST00000315286 AKR1C2P52895 323 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 VAMP2P63027 116 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 BTNL3Q6UXE8 466 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 ZNF561Q8N587 486 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 SDSLQ96GA7 329 aa15.27■□□□□ 0.03
CCDC43-201ENST00000315286 AGMATQ9BSE5 352 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms