RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMEM30BQ3MIR4 351 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 TBC1D26Q86UD7 250 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 TCTE3Q8IZS6 198 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 NARFLQ9H6Q4 476 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 GFOD1Q9NXC2 390 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 SHPKQ9UHJ6 478 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 RNF150Q9ULK6 438 aa18.6■□□□□ 0.57
IRF3-201ENST00000309877 OR5AC1P0C628 307 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 NFYBP25208 207 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 COL8A1P27658 744 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 ANKRD55Q3KP44 614 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 ZNF525Q8N782 197 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 GALNT14Q96FL9 552 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 CHIAQ9BZP6 476 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 OR2D2Q9H210 308 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 PATZ1Q9HBE1 687 aaKnown RBP18.59■□□□□ 0.57
IRF3-201ENST00000309877 PRR13Q9NZ81 148 aa18.59■□□□□ 0.57
IRF3-201ENST00000309877 C3orf85A0A1B0GTC6 90 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 TNFSF12O43508 249 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 PGLYRP1O75594 196 aaPredicted RBP18.58■□□□□ 0.57
IRF3-201ENST00000309877 SIX6O95475 246 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 CCL3L1P16619 93 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 SP6Q3SY56 376 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 PRAMEF5Q5TYX0 476 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 WDR25Q64LD2 544 aaPredicted RBP18.58■□□□□ 0.57
IRF3-201ENST00000309877 ZNF645Q8N7E2 425 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 OR10A7Q8NGE5 316 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 OR52M1Q8NGK5 317 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 SUCNR1Q9BXA5 334 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 PSG11Q9UQ72 335 aa18.58■□□□□ 0.57
IRF3-201ENST00000309877 PHF1O43189 567 aaPredicted RBP18.57■□□□□ 0.56
IRF3-201ENST00000309877 PDLIM4P50479 330 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 ST8SIA5O15466 376 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 IGLV2-14P01704 120 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 EIF2B2P49770 351 aaKnown RBP18.57■□□□□ 0.56
IRF3-201ENST00000309877 TMEM187Q14656 261 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 ZFP69Q49AA0 526 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 DRAM1Q8N682 238 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 ZBTB34Q8NCN2 500 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 FAM216AQ8WUB2 273 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 GPHA2Q96T91 129 aa18.57■□□□□ 0.56
IRF3-201ENST00000309877 USF3Q68DE3 2245 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 MMP23AO75900 390 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 IGHV3-7P01780 117 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 GIPP09681 153 aaPredicted RBP18.56■□□□□ 0.56
IRF3-201ENST00000309877 GNB2P62879 340 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 HEPN1Q6WQI6 88 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 OR5M8Q8NGP6 311 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 RAB39BQ96DA2 213 aa18.56■□□□□ 0.56
IRF3-201ENST00000309877 BARX1Q9HBU1 254 aaPredicted RBP18.56■□□□□ 0.56
IRF3-201ENST00000309877 RPUSD1Q9UJJ7 312 aaKnown RBP18.56■□□□□ 0.56
IRF3-201ENST00000309877 A0A1W2PPH5 198 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 DBX1A6NMT0 343 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 FAM25EA8MYX2 175 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 CCSO14618 274 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 ATP5J2P56134 94 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 H2BFSP57053 126 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 LEAP2Q969E1 77 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 TP53RKQ96S44 253 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 RAB18Q9NP72 206 aa18.55■□□□□ 0.56
IRF3-201ENST00000309877 F5H0A9 414 aaPredicted RBP18.54■□□□□ 0.56
IRF3-201ENST00000309877 ITGB1BP1O14713 200 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 OR2A4O95047 310 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 HLA-GP17693 338 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 F2RP25116 425 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 RAB7AP51149 207 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 MSMO1Q15800 293 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 DCAF12L2Q5VW00 463 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 LIAT1Q6ZQX7 453 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 OR51H1Q8NH63 302 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 GLYATL2Q8WU03 294 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 ABHD14BQ96IU4 210 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 OR2A7Q96R45 310 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 AGMATQ9BSE5 352 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 PDCD10Q9BUL8 212 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 METTL8Q9H825 291 aaKnown RBP18.54■□□□□ 0.56
IRF3-201ENST00000309877 SMLR1H3BR10 107 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 GPR12P47775 334 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 RAP2BP61225 183 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 SRPXP78539 464 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 ESCO2Q56NI9 601 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 LY6G6FQ5SQ64 297 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 LGI3Q8N145 548 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 ABHD14AQ9BUJ0 271 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 SSBP3Q9BWW4 388 aaPredicted RBP18.54■□□□□ 0.56
IRF3-201ENST00000309877 TMEM222Q9H0R3 208 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 PIPOXQ9P0Z9 390 aa18.54■□□□□ 0.56
IRF3-201ENST00000309877 PPIAL4CA0A0B4J2A2 164 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 C13orf42A0A1B0GVH6 325 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 C5orf51A6NDU8 294 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 RNF212BA8MTL3 300 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 H0Y980 276 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 B3GALNT1O75752 331 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 HOXB5P09067 269 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 PPIAL4GP0DN37 164 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 ZNF134P52741 427 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 ERVFRD-1P60508 538 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 ZNF787Q6DD87 383 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 GSG1LQ6UXU4 331 aa18.53■□□□□ 0.56
IRF3-201ENST00000309877 OR2T35Q8NGX2 323 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms