RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BANF2Q9H503 90 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 ESRP2Q9H6T0 727 aaKnown RBP4.14□□□□□ -1.75
CKS1B-201ENST00000308987 UNKLQ9H9P5 680 aaKnown RBP4.14□□□□□ -1.75
CKS1B-201ENST00000308987 NECAP2Q9NVZ3 263 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 IL36GQ9NZH8 169 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 METTL1Q9UBP6 276 aaKnown RBP4.14□□□□□ -1.75
CKS1B-201ENST00000308987 FBXL17Q9UF56 701 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 CACFD1Q9UGQ2 172 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 PRSS50Q9UI38 385 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 ANXA10Q9UJ72 324 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 FBXO9Q9UK97 447 aaPredicted RBP4.14□□□□□ -1.75
CKS1B-201ENST00000308987 AMDHD2Q9Y303 409 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 MGAM2Q2M2H8 2515 aa4.14□□□□□ -1.75
CKS1B-201ENST00000308987 DUXBA0A1W2PPF3 345 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A10PA6NDY2 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A18PA6NE21 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A16PA6NEW6 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A20PA6NIJ5 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A8PA6NJQ4 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A7PA6NKC0 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A22PA8MWA6 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A12PA8MX19 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 A8MXE2 369 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A5PA8MXJ8 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A23PA8MXZ1 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 UMAD1C9J7I0 102 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SMAD9O15198 467 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 RER1O15258 196 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SIGLEC5O15389 551 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 DHHO43323 396 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 GMFGO60234 142 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TNFSF13O75888 250 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CDS2O95674 445 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SERPINA5P05154 406 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SFTPBP07988 381 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 HOXB5P09067 269 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A15PP0C7V4 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A13PP0C7W8 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A14PP0C7W9 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM90A24PP0C7X0 464 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF728P0DKX0 622 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 OR5H8P0DN80 308 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FCGR2AP12318 317 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 MMP9P14780 707 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 DUSP1P28562 367 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 RPL35P42766 123 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 GLP1RP43220 463 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 KCNJ3P48549 501 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CSNK1A1P48729 337 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 ARHGDIBP52566 201 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 AKR1C2P52895 323 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LGALS4P56470 323 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CLDN15P56746 228 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM33P57088 247 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 S100A10P60903 97 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 MRPS34P82930 218 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 H3F3AP84243 136 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 AKR1C1Q04828 323 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM27E3Q08E93 113 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 ENDOGQ14249 297 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 HABP2Q14520 560 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TMEM187Q14656 261 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CNN3Q15417 329 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM27BQ5VT28 67 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 PRSS57Q6UWY2 283 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 Q6ZRG5 221 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TMPPEQ6ZT21 453 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LHFPL2Q6ZUX7 228 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM57BQ71RH2 274 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 GCNT2Q8N0V5 402 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LGI3Q8N145 548 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LRRC75A-AS1Q8N1F1 130 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LRRC18Q8N456 261 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CCDC71LQ8N9Z2 235 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 OR51F2Q8NH61 342 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SPTSSAQ969W0 71 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 HIST1H2BAQ96A08 127 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 PERPQ96FX8 193 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 MARS2Q96GW9 593 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 FAM71F1Q96KD3 344 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 LYZL4Q96KX0 146 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 WFIKKN1Q96NZ8 548 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 TRIB1Q96RU8 372 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SPIN2AQ99865 258 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SPIN2BQ9BPZ2 258 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 ZNF2Q9BSG1 426 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 EMC6Q9BV81 110 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SF3B5Q9BWJ5 86 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SCRT1Q9BWW7 348 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 RBM24Q9BX46 236 aaKnown RBP4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SLC35B3Q9H1N7 401 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 RGCCQ9H4X1 137 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 NAA60Q9H7X0 242 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 METTL7AQ9H8H3 244 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 CALHM2Q9HA72 323 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 BCO1Q9HAY6 547 aa4.13□□□□□ -1.75
CKS1B-201ENST00000308987 SEBOXQ9HB31 216 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms