RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 CLDN1O95832 211 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 KRASP01116 189 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 COL8A2P25067 703 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 ZNF816Q0VGE8 651 aaPredicted RBP14.06□□□□□ -0.16
SSH3-201ENST00000308127 RIPPLY2Q5TAB7 128 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 COLCA1Q6ZS62 124 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 FAM58AQ8N1B3 248 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 C14orf144Q96I85 54 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 THOC3Q96J01 351 aaKnown RBP14.06□□□□□ -0.16
SSH3-201ENST00000308127 SMIM7Q9BQ49 75 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 CLEC18AA5D8T8 446 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 CLDN34H7C241 214 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 PHOX2AO14813 284 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 DEGS1O15121 323 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 RAMP3O60896 148 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 DFFBO76075 338 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 MDH2P40926 338 aaKnown RBP14.06□□□□□ -0.16
SSH3-201ENST00000308127 WNT5AP41221 380 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 TMPRSS7Q7RTY8 843 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 CLEC18CQ8NCF0 446 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 LHX4Q969G2 390 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 TCFL5Q9UL49 500 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
SSH3-201ENST00000308127 GFRA1P56159 465 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 P2RY6Q15077 328 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 ZNF585BQ52M93 769 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 TCEAL6Q6IPX3 200 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 NUFIP2Q7Z417 695 aaKnown RBP14.05□□□□□ -0.16
SSH3-201ENST00000308127 CLN8Q9UBY8 286 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 PRSS50Q9UI38 385 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 PILRBQ9UKJ0 227 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 CEACAM1P13688 526 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 ALKBH6Q3KRA9 238 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 C16orf82Q7Z2V1 217 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 H1FOOQ8IZA3 346 aaPredicted RBP14.05□□□□□ -0.16
SSH3-201ENST00000308127 RPP25LQ8N5L8 163 aaKnown RBP14.05□□□□□ -0.16
SSH3-201ENST00000308127 HIST1H2BLQ99880 126 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 SDF2L1Q9HCN8 221 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 SOX15O60248 233 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 ZNF737O75373 536 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 BTNL3Q6UXE8 466 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 OR8G5Q8NG78 346 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 OR4X1Q8NH49 305 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 SIRT7Q9NRC8 400 aa14.05□□□□□ -0.16
SSH3-201ENST00000308127 PCSK5Q92824 1860 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 HIST1H1BP16401 226 aaKnown RBP14.04□□□□□ -0.16
SSH3-201ENST00000308127 G6PCP35575 357 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 CEACAM6P40199 344 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 APOBEC3DQ96AK3 386 aaPredicted RBP14.04□□□□□ -0.16
SSH3-201ENST00000308127 A0A1W2PPQ1 181 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 CYB5R3P00387 301 aaPredicted RBP14.04□□□□□ -0.16
SSH3-201ENST00000308127 GZMHP20718 246 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 S100GP29377 79 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 COL10A1Q03692 680 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 ACSM6Q6P461 480 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 TPRX1Q8N7U7 411 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 CT55Q8WUE5 264 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 OR5P3Q8WZ94 311 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 SLC39A9Q9NUM3 307 aa14.04□□□□□ -0.16
SSH3-201ENST00000308127 CISD1Q9NZ45 108 aaKnown RBP14.04□□□□□ -0.16
SSH3-201ENST00000308127 ANKRD30BLA7E2S9 258 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 DNPH1O43598 174 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 MT-CO3P00414 261 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 CELA3BP08861 270 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 CD81P60033 236 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 SLC38A11Q08AI6 406 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 DMRTC2Q8IXT2 367 aaPredicted RBP14.03□□□□□ -0.16
SSH3-201ENST00000308127 ZDHHC16Q969W1 377 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 RAB40CQ96S21 281 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 ZNF705GA8MUZ8 300 aaPredicted RBP14.03□□□□□ -0.16
SSH3-201ENST00000308127 CDIPTO14735 213 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 IL2RGP31785 369 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 Q8NFD4 153 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 TMEM37Q8WXS4 190 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 TECTBQ96PL2 329 aa14.03□□□□□ -0.16
SSH3-201ENST00000308127 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.16
SSH3-201ENST00000308127 PTBP3O95758 552 aaKnown RBP14.02□□□□□ -0.16
SSH3-201ENST00000308127 GRPP07492 148 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 PMS2CLQ68D20 193 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 NCR3LG1Q68D85 454 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 POM121L2Q96KW2 1035 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 PCGF1Q9BSM1 259 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 CEP250Q9BV73 2442 aa14.02□□□□□ -0.16
SSH3-201ENST00000308127 CADP27708 2225 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 OR2H2O95918 312 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 APLNRP35414 380 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 LHX2P50458 406 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 TFF3Q07654 80 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 LTC4SQ16873 150 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 Q6ZS49 121 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 WDR86Q86TI4 376 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 LRP11Q86VZ4 500 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 DRAM1Q8N682 238 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 OR4F5Q8NH21 305 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 OR4F4Q96R69 305 aa14.02□□□□□ -0.17
SSH3-201ENST00000308127 WDR61Q9GZS3 305 aaKnown RBP14.02□□□□□ -0.17
SSH3-201ENST00000308127 SMCO3A2RU48 225 aa14.01□□□□□ -0.17
SSH3-201ENST00000308127 CRYAAP02489 173 aa14.01□□□□□ -0.17
SSH3-201ENST00000308127 SNRPCP09234 159 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms