RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 DOLPP1Q86YN1 238 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 GALMQ96C23 342 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 ESRP2Q9H6T0 727 aaKnown RBP13.8□□□□□ -0.2
TVP23B-201ENST00000307767 UQCC1Q9NVA1 299 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 RNF150Q9ULK6 438 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 TP53TG5Q9Y2B4 290 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
TVP23B-201ENST00000307767 DMXL2Q8TDJ6 3036 aa13.8□□□□□ -0.2
TVP23B-201ENST00000307767 CHD3Q12873 2000 aaKnown RBP13.8□□□□□ -0.2
TVP23B-201ENST00000307767 PTPRZ1P23471 2315 aaPredicted RBP13.8□□□□□ -0.2
TVP23B-201ENST00000307767 MEX3AA1L020 520 aaKnown RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 OMGP23515 440 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 PRDX2P32119 198 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 DEFA5Q01523 94 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 PUSL1Q8N0Z8 303 aaKnown RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 ATMQ13315 3056 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 HEATR1Q9H583 2144 aaKnown RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 SPTBN2O15020 2390 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 FAM74A7A6NL05 159 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 ATP6V1G2-DDX39BF2Z307 99 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 LHBP01229 141 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 S100GP29377 79 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 GABRA2P47869 451 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 CLINT1Q14677 625 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 FAM74A3Q4VXF1 159 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 KRBOX4Q5JUW0 171 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
TVP23B-201ENST00000307767 KCNIP1Q9NZI2 227 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 KCNS2Q9ULS6 477 aa13.79□□□□□ -0.2
TVP23B-201ENST00000307767 MKRN2OSH3BPM6 223 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 CST7O76096 145 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 P0C879 139 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 PVALBP20472 110 aaPredicted RBP13.78□□□□□ -0.2
TVP23B-201ENST00000307767 DYNLT3P51808 116 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 ZNF645Q8N7E2 425 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 OR10Z1Q8NGY1 313 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 MEGF10Q96KG7 1140 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 OR2V2Q96R30 315 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
TVP23B-201ENST00000307767 CACNG5Q9UF02 275 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 A0A0G2JNJ9 132 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 K7N7A8 449 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 AGPAT2O15120 278 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 RAMP3O60896 148 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 CRYAAP02489 173 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 PPP1CCP36873 323 aaKnown RBP13.78□□□□□ -0.2
TVP23B-201ENST00000307767 F2RL1P55085 397 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 OR5C1Q8NGR4 320 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 LURAP1Q96LR2 239 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 AGMATQ9BSE5 352 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 Q9UFV3 132 aa13.78□□□□□ -0.2
TVP23B-201ENST00000307767 RBM7Q9Y580 266 aaKnown RBP13.78□□□□□ -0.2
TVP23B-201ENST00000307767 TXNL1O43396 289 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
TVP23B-201ENST00000307767 BMP5P22003 454 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 ATP6V0CP27449 155 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 IL2RGP31785 369 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 SP5Q6BEB4 398 aaPredicted RBP13.77□□□□□ -0.21
TVP23B-201ENST00000307767 SPACA3Q8IXA5 215 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 RFESDQ8TAC1 157 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 MRPL37Q9BZE1 423 aaKnown RBP13.77□□□□□ -0.21
TVP23B-201ENST00000307767 SLC25A31Q9H0C2 315 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 OR2D2Q9H210 308 aa13.77□□□□□ -0.21
TVP23B-201ENST00000307767 LIN7CQ9NUP9 197 aaKnown RBP13.77□□□□□ -0.21
TVP23B-201ENST00000307767 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 MED19A0JLT2 244 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 PROP1O75360 226 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 KLF3P57682 345 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 LINC00205P59089 165 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 VAMP2P63027 116 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 VHLLQ6RSH7 139 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 CISD2Q8N5K1 135 aaKnown RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 C17orf50Q8WW18 174 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 MUCL1Q96DR8 90 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 ABHD14AQ9BUJ0 271 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 NKX6-2Q9C056 277 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 IGHV3-43A0A0B4J1X8 118 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 IGHV3-43DP0DP04 118 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 ZNF16P17020 682 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 MZT1Q08AG7 82 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 FOXC1Q12948 553 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 CR1LQ2VPA4 569 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 MIDNQ504T8 468 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 MOGAT3Q86VF5 341 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 FGFRL1Q8N441 504 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 ITLN1Q8WWA0 313 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 COL25A1Q9BXS0 654 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-201ENST00000307767 SEC11CQ9BY50 192 aa13.76□□□□□ -0.21
TVP23B-201ENST00000307767 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
TVP23B-201ENST00000307767 H3BP45 60 aa13.75□□□□□ -0.21
TVP23B-201ENST00000307767 SPRY3O43610 288 aa13.75□□□□□ -0.21
TVP23B-201ENST00000307767 SNCAP37840 140 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms