RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 IGHV1OR15-9A0A0B4J2B8 117 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 A0A1W2PP11 408 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 KLF7O75840 302 aaPredicted RBP15.07■□□□□ 0
SYNPO-201ENST00000307662 CD8AP01732 235 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 IBA57Q5T440 356 aaKnown RBP15.07■□□□□ 0
SYNPO-201ENST00000307662 LEMD1Q68G75 181 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 UCN2Q96RP3 112 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 AMELYQ99218 206 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 WNT16Q9UBV4 365 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 K7EQS6 105 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 GNG7O60262 68 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 UQCRFS1P47985 274 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 SNRNP40Q96DI7 357 aaKnown RBP15.07■□□□□ 0
SYNPO-201ENST00000307662 TRGV8A0A0C4DH27 118 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 TMEM210A6NLX4 147 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 TAF15Q92804 592 aaKnown RBP eCLIP15.07■□□□□ 0
SYNPO-201ENST00000307662 C5orf66Q9H5L9 145 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 CARHSP1Q9Y2V2 147 aaKnown RBP15.07■□□□□ 0
SYNPO-201ENST00000307662 NXPH1P58417 271 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 CXorf66Q5JRM2 361 aaPredicted RBP15.07■□□□□ 0
SYNPO-201ENST00000307662 DEFB123Q8N688 67 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 A8MWL6 223 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 J3QR06 171 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 EML2O95834 649 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 DLX1P56177 255 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 SH3BGRL3Q9H299 93 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 PCOLCE2Q9UKZ9 415 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 OR51B2Q9Y5P1 312 aa15.07■□□□□ 0
SYNPO-201ENST00000307662 TRAV38-1A0A0B4J264 116 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 A8MXK9 166 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 PRSS53Q2L4Q9 553 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 OR1L8Q8NGR8 309 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 HARBI1Q96MB7 349 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 ARRDC1-AS1Q9H2J1 176 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 GLRX2Q9NS18 164 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.06■□□□□ 0
SYNPO-201ENST00000307662 HPRT1P00492 218 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 CD74P04233 296 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 SOD3P08294 240 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 RBM14Q96PK6 669 aaKnown RBP15.06■□□□□ 0
SYNPO-201ENST00000307662 MKRN2OSH3BPM6 223 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 AGAP20933 346 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 ZP1P60852 638 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 LAMTOR1Q6IAA8 161 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 TREM2Q9NZC2 230 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 TMEM108Q6UXF1 575 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 ZNF721Q8TF20 911 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 GSN-AS1Q9NRJ2 163 aa15.06■□□□□ 0
SYNPO-201ENST00000307662 TMEM265A0A087WTH1 108 aa15.05■□□□□ 0
SYNPO-201ENST00000307662 RPS11P62280 158 aaKnown RBP eCLIP15.05■□□□□ 0
SYNPO-201ENST00000307662 SH2D7A6NKC9 451 aaPredicted RBP15.05■□□□□ -0
SYNPO-201ENST00000307662 CEBPDP49716 269 aaPredicted RBP15.05■□□□□ -0
SYNPO-201ENST00000307662 CSRP3P50461 194 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 AESQ08117 197 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 IL36RNQ9UBH0 155 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 AMY1AP04745 511 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 RELBQ01201 579 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 OR52M1Q8NGK5 317 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 TMPRSS2O15393 492 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 DNPH1O43598 174 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 OR4A8P0C604 315 aa15.05■□□□□ -0
SYNPO-201ENST00000307662 LOC389332A0A1B0GUA5 103 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 GAB4Q2WGN9 574 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 ZNF788Q6ZQV5 615 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 TMEM183AQ8IXX5 376 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 SELENOHQ8IZQ5 122 aaKnown RBP15.04■□□□□ -0
SYNPO-201ENST00000307662 Q8WTZ3 238 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 SOSTQ9BQB4 213 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 SPINK14Q6IE38 97 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 SLC25A34Q6PIV7 304 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 WDR74Q6RFH5 385 aaPredicted RBP15.04■□□□□ -0
SYNPO-201ENST00000307662 POC1AQ8NBT0 407 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 RBKSQ9H477 322 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 TCTAP57738 103 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 PRNTQ86SH4 94 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 MOGAT3Q86VF5 341 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 NUDT16L1Q9BRJ7 211 aaKnown RBP15.04■□□□□ -0
SYNPO-201ENST00000307662 HES7Q9BYE0 225 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 FOXS1O43638 330 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 FGF12P61328 243 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 FAM27BQ5VT28 67 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 DGAT2L7PQ6IED9 249 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 GFRALQ6UXV0 394 aa15.04■□□□□ -0
SYNPO-201ENST00000307662 C5orf67F2Z3F1 127 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 TAS2R60P59551 318 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 OR10S1Q8NGN2 331 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 FAM216AQ8WUB2 273 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 ZNF385AQ96PM9 386 aaKnown RBP15.03■□□□□ -0
SYNPO-201ENST00000307662 WIPI2Q9Y4P8 454 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 TMSB15BA0A087X1C1 80 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 LEPROTL1O95214 131 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 NGFRP08138 427 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 ZNF600Q6ZNG1 722 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 IGLV1-36A0A0B4J1U3 117 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 LMX1BO60663 402 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 RNF224P0DH78 156 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 AREGP15514 252 aa15.03■□□□□ -0
SYNPO-201ENST00000307662 FAM222BQ8WU58 562 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms